Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01878 ATGGAAGATAGTTTCAGAGTTCGTGTAGAGAAAGCCTTCGGTTCTCTTCCAATTCCTTCTGCCGCTTCTCTTTGGTCTCTCTCCGAAGACGAAACCAACAACAAACCCAAACCCAAACCCGAATCCCAACCCAAACCCTACCCATCTTCTCCCCCTCTCGAACCTGAGCTGGAGAACGACCTCGACGACCTCGACGACGAAGATGAAAACGCCGCTCCATCTAAGCCCTCCGATTACGATGATGAACAGTGGCAGGTTAAATCCGGTATCGGTCTCGATTGCACCCTCGATTTTGAGGAAGAGGAAGATCATTATGACAAACAAGCTTTAGGCCAAGATGACTTGGGGGATCGTGTGTATATGAGTGCTATAAATGAAGATGGAATTGGGATAAGTTCTCGTGCGTTTGGAGGTTTTTCAAGAGACCCGCGAGCGAATCACATGGCTGCTAAGATTAAGCTGGAACAGGATGATGGAGGAGCAAACGGAATTGATGATGTTTTGCGAGTCTCTGCCAAATCTACTACACCTGACATTGGTGGCGGTGGCGGTGGGGGTGATTCTGTTAGCGTTAACCCGAAGTCAATTTTGAAGAGTAAAGATAATACATCGGAGTCTAGGCCTAATAAACGTGTTCGGTTTGATTCGGAACGTGTTGATGGTGACGGTGATGATGATGGGAAGGAAGGAACCAGGGATGTTCGCATGAAGAGCTCTTCAATGGAAGAGGACGCAGCTTTAAATCAGCCATCGAAGTTGCAGGAATTTGCTTCTGCAGTTCCTGATTATATCCGCAATCCTTCAAGATATACACATTATACTTTTGATTCTTCAACTGACATTGATGACAAAGCAAATAAGGAGGCATACATGAGCTTCCTTGCACAGATAAAAGGTTCAAATGCATCTACAGAGGCCGATGAAGCGTTGGATGATCTTCCATCTGTTACCTTTATACCAAAGAAGAAATCTGGTGATGTAACCATGGGAGAGAATGAGACAGTGTCAAAGCTTAAGCTTGATGTTGAAAAGGATTGTATGAATAAAAAGGCTTTCCCTGTTACTGTAGCTGCTGCTGGCGACACTGAAAATAGTGATGTATGTGCAATGGAGGAGGATGAAGAGGAAGTTATCGAGGATACTAAAAGAAGCTCTCAGAGGTCAAACCGCAAGTACAGGAAGAAAACCGATGAGGAGTTGGAGGAGCCTGTTATTTAA 1218 0.4499 MEDSFRVRVEKAFGSLPIPSAASLWSLSEDETNNKPKPKPESQPKPYPSSPPLEPELENDLDDLDDEDENAAPSKPSDYDDEQWQVKSGIGLDCTLDFEEEEDHYDKQALGQDDLGDRVYMSAINEDGIGISSRAFGGFSRDPRANHMAAKIKLEQDDGGANGIDDVLRVSAKSTTPDIGGGGGGGDSVSVNPKSILKSKDNTSESRPNKRVRFDSERVDGDGDDDGKEGTRDVRMKSSSMEEDAALNQPSKLQEFASAVPDYIRNPSRYTHYTFDSSTDIDDKANKEAYMSFLAQIKGSNASTEADEALDDLPSVTFIPKKKSGDVTMGENETVSKLKLDVEKDCMNKKAFPVTVAAAGDTENSDVCAMEEDEEEVIEDTKRSSQRSNRKYRKKTDEELEEPVI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01878 405 MobiDBLite consensus disorder prediction 19 86 - -
Vifa5g01878 405 MobiDBLite consensus disorder prediction 172 252 - -
Vifa5g01878 405 MobiDBLite consensus disorder prediction 39 53 - -
Vifa5g01878 405 MobiDBLite consensus disorder prediction 379 405 - -
Vifa5g01878 405 MobiDBLite consensus disorder prediction 361 405 - -
Vifa5g01878 405 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 400 IPR029338 -
Vifa5g01878 405 MobiDBLite consensus disorder prediction 200 240 - -
Vifa5g01878 405 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 250 300 IPR029338 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01878 - - gmx:100820108 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01878 5 545445357 545446891 Vifa5g01878 5 545445357 545446891 ECH