Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01860 ATGGAGAATGAAGATGGTCAATCATGGAGTTCTGCTCCTATCTACCAATCTCAATGGCTTCAAACAACCATATCAGAATTGGATGACAAATTGGGAGCCATGACGACTATTTTAGAAGATGGCAATTCTCCAAACCAAGAACACATGTACTGCAAATGGAGAGAAGACCTTATACAGATGCTTGAAGAGTTTGGCCAATCATACCGTGTTTTAGCCTTAGCTTATAACCAACTAAAGTCTAAAACATCTCATGGTTCCTTCAATTCAGGATCTTTATCATATTCTGCTACATCAAAAACAATATGTACTGGCTGCACCCGAAGAGCAACAGGTAGCTTGGAGAATAAGAAACCCGGAAAGGGTTATAATAGCTCTATGAAATCTCTCTCGAAGCATTCTGATGTCAAATCTAATGGGACTAATCTGGATTTTGAGATATTAAAGAAGCAAGAAGATGACGTATTTCCATCATCTAACCTTTGCAGCCTGAAATTAGAATCAGAAGTTGAGTGCTTTGACATTCAACTTGAAGACAGAATGACAGATTATTCCACCAATGAAAATATTTTAATGAAGATTGAGGATATGGAATTAAAACAGGGAACTGAAGATCCATTAATAATCAGTTCCGAATATGAAAGTACGTGGCCAGCATTGAAGTATCAGATGACAAAACTTACCGATGATACTCTGCACCAGATAGAAGAGTTGGTCCAAAGAAATGATGAAAAAAGGGAAACCATTAGAAGGCTTCAGCTAGAGGTGGAAACTTTGAAGCACGAAAACAAGGCCCTCCAGAATTCATCAAGGAACTCCAATGCTGATTCAGAATGCAGCCAATCACAGATATCAAGACCAGTAAGAAAATCTGTGAGCAAGTTCTTCAGAGGTTGCACTCCATGA 903 0.3854 MENEDGQSWSSAPIYQSQWLQTTISELDDKLGAMTTILEDGNSPNQEHMYCKWREDLIQMLEEFGQSYRVLALAYNQLKSKTSHGSFNSGSLSYSATSKTICTGCTRRATGSLENKKPGKGYNSSMKSLSKHSDVKSNGTNLDFEILKKQEDDVFPSSNLCSLKLESEVECFDIQLEDRMTDYSTNENILMKIEDMELKQGTEDPLIISSEYESTWPALKYQMTKLTDDTLHQIEELVQRNDEKRETIRRLQLEVETLKHENKALQNSSRNSNADSECSQSQISRPVRKSVSKFFRGCTP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01860 300 Coils Coil 234 275 - -
Vifa5g01860 300 MobiDBLite consensus disorder prediction 117 134 - -
Vifa5g01860 300 PANTHER PROTEIN NETWORKED 4A 9 84 - -
Vifa5g01860 300 Pfam KIP1-like protein 14 76 IPR011684 GO:0003779
Vifa5g01860 300 MobiDBLite consensus disorder prediction 264 288 - -
Vifa5g01860 300 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 82 IPR011684 GO:0003779
Vifa5g01860 300 MobiDBLite consensus disorder prediction 113 134 - -
Vifa5g01860 300 MobiDBLite consensus disorder prediction 262 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01860 Vifa-Chr5 543922311 543923699 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01860 - - tpra:123888152 426.017