Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01847 ATGGCGGATCCAATCTCCAAATCTCTGATTGCTTTTCTGCTCATAGCTTCTCTCTTGCTATTCTCACACGCTTCCTCCGACGTTCCCTTCATCGTCGCTCACAAGAAGGCTTCTCTCAACCGGCTCAAGACTGGCGCTGAAAGAGTCTCTGTCACCATCGATATCTACAACCAAGGAACCTCGACGGCATATGATGTGAGTCTCTCAGATGAGAGTTGGCCAACAGACCTTTTCAGTATAATCAGTGGTACCACTTCAAAGACATGGGAAAAGCTTGATGCTGGTGGTGTCCTCTCTCACACATTTGAGCTGGAGGCAAAATCAAAGGGAGTATTTTCTGGTGAACCAGCTGTCATCAAGTTCCGTGTCCCCACAAACGCTGTTTTACAGGTGGCACTTTCAACTCCCATATTGCCGTTAGATGTTCTTGCTGACAGGCCTCCGGAGAAGAAGTTTGAATGGAGGTTGCTGGCTAAGTATGGATCTTTAATCTCGGTGATCAGCATAATTGTTATGTTTGTGTACCTGGTAGCTACCCCATCAAAATCAGGCAAAGGAGGCAAGAAGAAGAGAAATTAG 579 0.4646 MADPISKSLIAFLLIASLLLFSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGTSTAYDVSLSDESWPTDLFSIISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFSGEPAVIKFRVPTNAVLQVALSTPILPLDVLADRPPEKKFEWRLLAKYGSLISVISIIVMFVYLVATPSKSGKGGKKKRN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01847 192 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 11 187 - -
Vifa5g01847 192 Pfam Translocon-associated protein beta (TRAPB) 15 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01847 Vifa-Chr5 540407995 540410400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01847 K13250 - gmx:100500066 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01847 5 540407995 540410400 Vifa5g01847 5 540407995 540410400 ECH