Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01833 ATGGCGGCAGCCGGGACTTGTTTTCTCCCTGGCGTTTCCTCGCCGCTTTTCCGCCGGGAGCCACCTCAGCTTCATGGGAAACTGAATCCAGCTCGGACTCAGAGCATGTCCCCGCGCTTCGCCATGTCCGTTGACCGAGTGCCGGCAACACTGGTGGCGGCGGAGAAAGGAAACACGGTGGAGTTAAAACGAGAAGAAGGTGGTGCGGAGGAGATAGATAAGCGTTGGGAAGAAAAGGAAGAGAAGCAGAGACGGAGTGGTTGGAAAGAGTATTTGGAGCAAGCGACGGATTTGATAGTTGGTGACGGTGGACCGCCGCGGTGGTTTTCGCCGTTGGAGTGTGGCTCGCGGTTGGATAATTCTCCTCTTATGCTGTTCTTGCCGGGAATTGATGGCTTGGGACTTGGACTTATTTCACATCATCAAAAACTGGGAAGGATTTTTGATTTATGGTGCTTGCATATTCCAGTTGCGGATCGAACATCATTTACAGACCTTGTGAAATTAGTCGAGACAACAGTTAGGTCAGAATATCAACGTTCACCGAATAGGCCCATATATCTTGTTGGAGAATCTTTAGGAGGGTGTCTCGCATTGGCTGTTGCTGCCCGTAACGGTGATATTGATCTTGTACTAATTTTGGCAAATCCAGCTAGTTCGTTCAGCAAGTCCCAATTGCAACTTCTAATACCATTGTTGGAAGCTTTGCCTGACTCGTTCTCTCCTGCCCTGCCGAACATTCTCAGTTTGACAGCTGGTGACCCTCTGAGGATGGTGTTGGATAACTTCGTGAAAGGACTTCCTCTACAAAATACAGCTAGAGAGCTAATAGAGGACTTTACTACTTTCTCATCATCGCTTCCTGTTCTGGCAGACATTTTACCAAAAGAAACACTTCTGTGGAAACTAAAGATGTTTAAGTCTGCTTCTGATTATGCCAATTCTCGTCTTTATGCTATCAAAGCTCAGACTTTGATACTTTGCAGTGGAAATGATCAATTATTACCCAGCCAACAGGAAGGTAAAAAACTATATAAGTTACTGCCTAATTGCCAGCTCCGCGAATTTGATGACAGTGGACATTTCCTATTACTGCAGGAAGGCAGCATTGACCTTGTAACCATCCTCAAGGGAGCTTCCTACTACCGACGTGGCAAGTATCTCGACTATGTTTCTGATTTCATACCGCCTACACCTTATGAAGCCAAAGAAGTAATACAATCAAACAGTTTGATTACTGCTGTCACAAGTGCTGTAATGCTTTCAACTTTGGAGGATGGAACGATTGTAAAGGGACTAGCTGGAATTCCTTCAGAAGGACCTGTTTTATTTGTTGGGTACCACATGTTGCTAGGATTGGAATTAGTTCCCTTGGTTTCTCGAATTCTTTTGGAAAGAGATATCCTCGTAAGAGGAATAGCACATCCTATGATTTTTAGGAAAGAAAAAAATGGAAGATTGCCAGAAGTATCTTCTTTTGACACATTCAGAATTATGGGTGCTGTTCCTGTGGCACCATCTAACCTTTTCAAGCTTTTATCTTCCAAGTCACATGTCCTGTTATATCCTGGAGGGATGCGCGAGGCTCTTCATAGAAAGGGTGAAGAATACAAGTTATTTTGGCCTGAACAATCTGAGTTTGTCAGGATGGCAGCAAGATTTGGAGCCAAAATTGTACCTTTCGGTGCTGTTGGAGAAGATGATCTTGGCGAAGTTGTGTTTGATTATGATGACCTGATGAAGATTCCTTACTTTAAGTCCGAAATAGAAAACCTTACGAAAGAGGCTATGCCGTTGAGGGCTGATGCTAGTGGCGAGGTGGCGAATCAACAAGTGCATTTGCCTGGAATTTTGCCTAAAGTTCCGGGCCGATTCTACTATTATTTTGGAAAACCAATTGAAACAAAAGGGAGGAAACAAGAACTTAAGGATAGGGAGAAATCTCAAGAATTATATTTTGAAGTGAAATCTGAGGTTGAGAGATGCATTGCTTATTTAAAGGAGAAACGAGAAAGCGACCCTTACAGAAGTATACTGTCACGGTTATTATACCAAGCTACACATGGTTTTACATCTGATATTCCAACATTTGAAATTTGA 2100 0.4367 MAAAGTCFLPGVSSPLFRREPPQLHGKLNPARTQSMSPRFAMSVDRVPATLVAAEKGNTVELKREEGGAEEIDKRWEEKEEKQRRSGWKEYLEQATDLIVGDGGPPRWFSPLECGSRLDNSPLMLFLPGIDGLGLGLISHHQKLGRIFDLWCLHIPVADRTSFTDLVKLVETTVRSEYQRSPNRPIYLVGESLGGCLALAVAARNGDIDLVLILANPASSFSKSQLQLLIPLLEALPDSFSPALPNILSLTAGDPLRMVLDNFVKGLPLQNTARELIEDFTTFSSSLPVLADILPKETLLWKLKMFKSASDYANSRLYAIKAQTLILCSGNDQLLPSQQEGKKLYKLLPNCQLREFDDSGHFLLLQEGSIDLVTILKGASYYRRGKYLDYVSDFIPPTPYEAKEVIQSNSLITAVTSAVMLSTLEDGTIVKGLAGIPSEGPVLFVGYHMLLGLELVPLVSRILLERDILVRGIAHPMIFRKEKNGRLPEVSSFDTFRIMGAVPVAPSNLFKLLSSKSHVLLYPGGMREALHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGAVGEDDLGEVVFDYDDLMKIPYFKSEIENLTKEAMPLRADASGEVANQQVHLPGILPKVPGRFYYYFGKPIETKGRKQELKDREKSQELYFEVKSEVERCIAYLKEKRESDPYRSILSRLLYQATHGFTSDIPTFEI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01833 699 MobiDBLite consensus disorder prediction 1 37 - -
Vifa5g01833 699 SUPERFAMILY alpha/beta-Hydrolases 120 365 IPR029058 -
Vifa5g01833 699 CDD LPLAT_MGAT-like 430 664 - -
Vifa5g01833 699 Gene3D alpha/beta hydrolase 153 374 IPR029058 -
Vifa5g01833 699 Pfam Serine aminopeptidase, S33 161 364 IPR022742 -
Vifa5g01833 699 PANTHER TRANSMEMBRANE PROTEIN 68 70 698 - -
Vifa5g01833 699 Pfam Diacylglycerol acyltransferase 498 571 IPR007130 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01833 Vifa-Chr5 535586863 535596017 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01833 - - gmx:100811435 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01833 5 535586863 535596017 Vifa5g01833 5 535586863 535596017 ECH