Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01750 ATGGGTTGCGCGGCGTCGAAGCTAGAAAACGAAGACACTGTACGGCGGTGCAAAGACCGTCGCCGTCTCATGAAAGAAGCTGTCTACGCGCGTCACCATCTGGCCGCTGCACACTCCGACTACTGCCGGTCACTTCGCCTCACTGGCACTGCTCTCTCTACATTCGCCGCCGGTGAGCCTCTTTCCGTCTCCGATAATACCCCCGCCGTATTCATCAATCATAAAACCACCACTCCCATCCCCACCACCGCCGCGAAAACGTTCCACCATCCACCGAAACCACAACCACCGTCTCCTTCACCGTCTTCCTTCCACCACCGTCCTCCGCCGCAGCAACAGTTTCAACCTTCACCTTCTCCCACTATAACCTCCTCAAAACTCCCTCACATCCTCTCTTCTTCCACAAATGAACACAACCACCCTCGCCGCCGTAAACCACCGCCACCGAAACTCCCTCACATTCTCTCCGATTCAAGCCCTTCTTCTACACCGCGAAGCAACTTCTCCAACAATTTCGCTCCCGGTTTCTTCCCTACAGCACATTCTACATACTCTTCCACACCTTCTCAAACTTCCTCCGTTTGGAATTGGGAGAATTTCTACCCTCCTCCTCCACCCCCGCCGGGCTCCGATTACTTCGACCGAGAGCATGAACACGAACATGACCAAGAAGATTCTATTTCTCAATTCTCTTTCAAGTCAAGAAATAGCGAAATTCCTTATTCCCGACAACATCCTCAACAACAACAACAACAACCACGAATACAAACATATCAACAACAGCAACAACAGCAACAAGGTTATCCTAATCCAACATCACATGAAGTGGAAGGATTTGATTCTGAGAGATCAGAATACGATTATTTCAACAGAAAACTCGCAACGGTTCAGAAGAATCCTAGTCATCATCATTTGGATGAACAACACACTGAGACGGAGCGAGAGGAGGTTGAGTGTAGTGAATGGGGAGATCATTACAGCACAACTTCATCTTCCGAGGAGGAGGATGAAGATGATGATGGGGTTGATGGGGATGTTGAGTCAAGGTCTGAGATTGGGACTAGATCAAATTTCGGATCATCATCTGCAGCAGCAAAAGGACATGTTGCGGCGGTGGGGAAATCAGATGATGTAGCATCGTCTTCGATGGGTGAAGGGGTAATGGAGATGAAGATGGTGGTGAGACATAGAGATTTGAAGGAGATTGTGGATTCTATTAAGGAGAATTTTGATAAAGCCGCTGTTGCTGGAGATCAAGTTTCGGAGATGCTTGAGATTAGTAAAGCTCAGCTTGATCGAAGTTTCAGACAATTGAGGAAAACTGTGTATCATTCAAATAGTCTATTGAGCAGCCTGAGCTCGACTTGGACCTCAAAACCACCGTTGGCGGTGAAGTACCGGCTCGAGCCCGGTTCGTTGAATGAACCGGGTGGTCTGAAGAGTCTTTGCTCCTCTTTGGAACGACTTTTGGCTTGGGAGAAGAAGCTCTATGATGAAGTCAAGTCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCCCTGCAGAGTCAGGAATACAAAGGAGACGATGAAGCAAAGATATTCAAAACCAAGACTTCCATCAATAAGTTGCAGTCGCTAATTGTTGTTACATCACAAGCTGTGTCTACCACCTCGACCGCCATTGTTGGCCTTAGAGACTCCGATCTTGTTCCTCAGCTTGTTGAACTCTGTCATGGAATGATGTACATGTGGAGATCAATGCATCAGTACCATGAAGTCCAAAGCAACATAGTTCAGCAAGTTCGTGGCCTGGTGAATAGATCGGGAGGAGGCGATTCTACTTCTGAACTGCACAGGCAGGCAACTCGTGACCTTGAATCCGCCGTCTCGGCTTGGCACTCGAGTTTTTGTCGCCTTATAAAATTTCAACGGGACTTTATTCTCTCCTTACATGGTTGGTTTAAGCTTAGTCTTAATCCGGTTGATAACGATAACGTCAACAACAGAATGGAACACTCCGACGCCTACATGTTTTTTGATGACTGGAAGCTTGCACTTGACCGTGTCCCTGATACCGTTGCGTCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAGCCGAAGAACTCAAGATAAAGAAGCGAACCGAGAACGCTTCCAAGGAACTCGAGAAAAAGGCTTCGTCTGTACGGAATATAGAAAGAAAGTTTTACAGCTCATATTCTTTGGTAGGGATTAGCCTTCCTGACTCCGCGCCTGATAATGGACAAGGCTTAGACGCGTGCGATCCACTTGCTGAGAAAAAACTAGAACTAGCAACCTGCCAAAGACGCGTTGAAGATGAAATGATGAAGCATTCGAAAGCCGTAGAGGTAACAAGAGCAATGACACTCAACAATCTTCAGACAGGCTTGCCCGGAGTCTTTCAAGCATTGACCAGTTTTTCTTCGTTGTTCACCGAGGCTCTCGACTCGGTGTGTACTCGGTCGTACGCCATCAAATAG 2514 0.473 MGCAASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRLTGTALSTFAAGEPLSVSDNTPAVFINHKTTTPIPTTAAKTFHHPPKPQPPSPSPSSFHHRPPPQQQFQPSPSPTITSSKLPHILSSSTNEHNHPRRRKPPPPKLPHILSDSSPSSTPRSNFSNNFAPGFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPPGSDYFDREHEHEHDQEDSISQFSFKSRNSEIPYSRQHPQQQQQQPRIQTYQQQQQQQQGYPNPTSHEVEGFDSERSEYDYFNRKLATVQKNPSHHHLDEQHTETEREEVECSEWGDHYSTTSSSEEEDEDDDGVDGDVESRSEIGTRSNFGSSSAAAKGHVAAVGKSDDVASSSMGEGVMEMKMVVRHRDLKEIVDSIKENFDKAAVAGDQVSEMLEISKAQLDRSFRQLRKTVYHSNSLLSSLSSTWTSKPPLAVKYRLEPGSLNEPGGLKSLCSSLERLLAWEKKLYDEVKSREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKTSINKLQSLIVVTSQAVSTTSTAIVGLRDSDLVPQLVELCHGMMYMWRSMHQYHEVQSNIVQQVRGLVNRSGGGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLNPVDNDNVNNRMEHSDAYMFFDDWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTENASKELEKKASSVRNIERKFYSSYSLVGISLPDSAPDNGQGLDACDPLAEKKLELATCQRRVEDEMMKHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALDSVCTRSYAIK 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01750 837 MobiDBLite consensus disorder prediction 331 345 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 117 135 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 229 272 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 295 381 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 211 228 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 90 116 - -
Vifa5g01750 837 PANTHER UNCHARACTERIZED 1 831 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 299 322 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 197 277 - -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 155 170 - -
Vifa5g01750 837 Pfam Protein of unknown function (DUF632) 399 703 IPR006867 -
Vifa5g01750 837 MobiDBLite consensus disorder prediction 81 170 - -
Vifa5g01750 837 Coils Coil 716 739 - -
Vifa5g01750 837 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01750 Vifa-Chr5 510678424 510683334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01750 484 651 Acyl Lipid Metabolism Gene Families AT2G27090 37.427 4.50e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01750 - - gmx:100815888 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01750 5 510678424 510683334 Vifa5g01750 5 510678424 510683334 ECH
Vifa4g00067 4 7438252 7438533 Vifa5g01750 5 510678424 510683334 PCT