Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01670 ATGAGTTTCTGTCCGTGTTTTGGCGATGAAAGATCCGAACCGCCACTAGCGGACCGTGACCCGGTTCTACTAGTCTCAGGCATGGGTGGCTCCATTCTCCACTCAAAGCCCAAGAAATTCGGATTAACCACTCGTGTTTGGGTCAGAATCTTCCTCGCTGACTTAGAATTCCGAAAGAAGATTTGGTCACTTTACAATCCCAAAACAGGGTATACTGAAACTTTAGACAAGAAATCTCTTATTGTTGTTCCTGATGATGATCACGGTCTCTATGCAATTGATATTTTGGATCCATCATGGTTTGTAAAATGTGTGCATTTGACAGAGGTGTATCATTTTCATGACATGATTGACATGCTTGTTGGATGTGGGTATGTTAAAGGAACCACTTTGTTTGGATACGGATATGATTTCAGACAAAGCAATAGGATGGAAAAGTTAATGGATGGCCTTAAACTCAAGTTGGAAACTGCTTACAAAGCCTCTGGTGGAAGAAAAGTCAATATAATTTCACACTCCATGGGAGGGGTTATGATCTTGTGTTTCATGTCACTTTGCAGAGATGCATTTTCAAAATATGTGAATAAGTGGATTGCCTTGGCCTGCCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTCTCTATTAACTGGATTACAATTTGTTGAGGGCCTAGAAAGCTATTTTTTTGTATCAAGGTGGACTTTTCATCAATTGCTAGTCGAGTGTCCATCAATCTATGAGATGTTGGCAAATCCGGATTATAAATGGAAAAAGATGCCAGAAATTAAAGTTTGGCGAAAGCTTACAAAGGATGGGAATGAAAACATCAATTTGGAATCTTATGGACCAACCCAGAGTATCTCTGTATTTGAAGAAGCGCTGAGGCACAACGAGCTAAAGTATAACGGGAAATCAATACCATTGCCCTTTAATACAACTATCTATAAATGGGCTACTGGAACTCGTCAAATTATAAGTAATGCTAAACTACCAAACGGAGTCTGCTTCTATAACATTTATGGAACATCATTTGAAACACCTTTTGATGTTTGCTATGGTTCGGAAAAATCTCCAATTGAGGACTTATCTGAAATATGCAAGACATTGCCTCAATATTCTTATGTTGATGGAGATGGATCAGTTCCTGTTGAATCTGCCAAGGCCGATGGACTTGAAGCTGTTGAAAGGGTAGGAGTTACTGCTGATCACCGTGGATTATTAAGAGACAAAACTGTATTTAAACTTATTCAGAAATGGTTGGATATTGAGCCAGTGGTTAGCAAGCAATCTAAAACATCAAAAGTAGCAGATGCGAATACAATCAATCCTATGCTTCTCTAA 1344 0.3943 MSFCPCFGDERSEPPLADRDPVLLVSGMGGSILHSKPKKFGLTTRVWVRIFLADLEFRKKIWSLYNPKTGYTETLDKKSLIVVPDDDHGLYAIDILDPSWFVKCVHLTEVYHFHDMIDMLVGCGYVKGTTLFGYGYDFRQSNRMEKLMDGLKLKLETAYKASGGRKVNIISHSMGGVMILCFMSLCRDAFSKYVNKWIALACPFQGAPGCINDSLLTGLQFVEGLESYFFVSRWTFHQLLVECPSIYEMLANPDYKWKKMPEIKVWRKLTKDGNENINLESYGPTQSISVFEEALRHNELKYNGKSIPLPFNTTIYKWATGTRQIISNAKLPNGVCFYNIYGTSFETPFDVCYGSEKSPIEDLSEICKTLPQYSYVDGDGSVPVESAKADGLEAVERVGVTADHRGLLRDKTVFKLIQKWLDIEPVVSKQSKTSKVADANTINPMLL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01670 447 SUPERFAMILY alpha/beta-Hydrolases 18 412 IPR029058 -
Vifa5g01670 447 Gene3D alpha/beta hydrolase 78 422 IPR029058 -
Vifa5g01670 447 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 12 435 - -
Vifa5g01670 447 Pfam Lecithin:cholesterol acyltransferase 82 251 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01670 Vifa-Chr5 491183790 491192808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01670 4 439 Acyl Lipid Metabolism Gene Families AT3G03310 68.707 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01670 K22389 - gmx:100797043 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01670 5 491183790 491192808 Vifa5g01670 5 491183790 491192808 ECH