Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01664 ATGGCGGCGAGAAGAACCGGTTTACCTCTGATGAATTACCTTAGAGTGCAGGTTGATACTCTTCCGCTCAACCACCAATCTCCTCTGCGTCTTCTTCCCAATTTCTTCCTCCGCCACTTTAGCGAAGAGGTTAGGGGTTCTTTCCTCGATAAATCTGAGGTCACAGATCGCGTTGTTTCTTGCGTAAAAAACTTCCAGAAAGTAGATCCTTCTAAGATTACTCCATCTGCTCATTTCCAGAACGACCTTGGATTGGATAGTTTAGATGCTGTAGAGATTGTGATGGCTCTTGAGGAAGAGTTTGGATTTGAGATTCCTGATAATGAAGCAGACAAGATTAACTCCATTAATCTTGCAATCGACTTCATTGCATCTCATCCACAGGCAAAGTAG 393 0.4351 MAARRTGLPLMNYLRVQVDTLPLNHQSPLRLLPNFFLRHFSEEVRGSFLDKSEVTDRVVSCVKNFQKVDPSKITPSAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSINLAIDFIASHPQAK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01664 130 ProSitePatterns Phosphopantetheine attachment site. 82 97 IPR006162 -
Vifa5g01664 130 Pfam Phosphopantetheine attachment site 56 121 IPR009081 -
Vifa5g01664 130 SMART Phosphopantetheine attachment site 55 113 IPR020806 GO:0031177
Vifa5g01664 130 Gene3D - 41 129 IPR036736 -
Vifa5g01664 130 PANTHER ACYL CARRIER PROTEIN 12 128 IPR003231 GO:0006633
Vifa5g01664 130 Hamap Acyl carrier protein [acpP]. 53 127 IPR003231 GO:0006633
Vifa5g01664 130 SUPERFAMILY ACP-like 50 126 IPR036736 -
Vifa5g01664 130 ProSiteProfiles Carrier protein (CP) domain profile. 52 127 IPR009081 -
Vifa5g01664 130 NCBIfam acyl carrier protein 52 126 IPR003231 GO:0006633
Vifa5g01664 130 FunFam Acyl carrier protein 41 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01664 Vifa-Chr5 489114732 489116452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01664 1 130 Acyl Lipid Metabolism Gene Families AT1G65290 72.519 3.89e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01664 K03955 - gmx:100305656 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01664 5 489114732 489116452 Vifa5g01664 5 489114732 489116452 ECH