LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g01660	ATGGATGCTATACGGAAGCAGCTCGATGTGCTCATGGGAGCCAATCGAAACGGCGACGTCCGTGAAGTTAACCGCAAGTATTACGATCGCGACGTTTGCCGTCTCTACCTCGTCGTCTTTGCCCTCACGAACTCTTCCAGTTCACTCATTGCAGCTCAGAAAGAATATGAGGAAGCCAGAGGCAAGGGGATCGATAATTACGAGAGGGAGTTGGAGGATGTTATAGATAAGCTCATTGGGGAATGTGATAGGAAAATTGGTAGAGCTCTTAAGAGACTTGAGGATGATGATGCTAAAGCGGCAATTGCAATTTCGGTATCTGAAGTTACTCAGACACCGGAAGTGCTTGAGTTGGCCAAAGAAATCAAAGAAAAGTTGAAAGAAGCTGATAAATATGATCTTGATGGCTTGTCAGATATGAAGATTAGAGCTTTAGAGATTGTTGAAGAACTTAGAATCAAAAGAGCCGACAAACAGTCCACGCTTCTTTTAGATGCATTCAACAAAGATAGGGCATCTCTACCTCAACCTCTGCCAAATCCACCCCCATTGGCACCCCTTCCTGTAATTACTCCCGATGCTCGAACACAGGAGATGATAAATGAAAAGTTGAAGAAGGCTGAGGATCTTGGTGAACAAGGATTGATTGATGAGGCACAGAAAGCTTTGGAAGAGGCCGAAGCACTTAAGAAGCTTCCTTCCAGGCAGGAGCCAGCACTGGATTCATCAAAGTATACCGCTGCAGATGTGCGGATTACTGATCAAAAGCTACGTGTGTGCGACATCTGTGGAGCATTTCTAAGTGTGTATGACAGTGATCGTCGATTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAAATTCGTGAGAAGTTGGCAGAACTTCAAGAAGAAAGGAACAAGAGCCGTAAGACTGATCGTCTTGATGACAGAAGATCAAAAGAAAGGAGTAGGGACCGTGACAGGGAGCCAAGTAGGGACCGTGAACGTGGTGAGAGCCATGAGCGAGGGCGAGAGAATGATCGCAGGAGCAGGGACCGTGATAGGCACCATGATAGAGACCGTGGATATGACCGAGATCGGGACAGAGACTCATCACGTTCATATGATTCAAGAAGTCGTCGGAGGTCACGATCTCGAGAGCGTTCTAGAGATTATGATCGTCATAGGCGTCATGATCGGTATTAG	1197	0.4612	MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVVFALTNSSSSLIAAQKEYEEARGKGIDNYERELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELAKEIKEKLKEADKYDLDGLSDMKIRALEIVEELRIKRADKQSTLLLDAFNKDRASLPQPLPNPPPLAPLPVITPDARTQEMINEKLKKAEDLGEQGLIDEAQKALEEAEALKKLPSRQEPALDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRRSKERSRDRDREPSRDRERGESHERGRENDRRSRDRDRHHDRDRGYDRDRDRDSSRSYDSRSRRRSRSRERSRDYDRHRRHDRY	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g01660	398	Coils	Coil	288	308	-	-
	Vifa5g01660	398	PANTHER	RNA-BINDING PROTEIN LUC7-RELATED	1	394	IPR004882	GO:0003729\|GO:0005685\|GO:0006376
	Vifa5g01660	398	MobiDBLite	consensus disorder prediction	300	398	-	-
	Vifa5g01660	398	Pfam	LUC7 N_terminus	196	313	IPR004882	GO:0003729\|GO:0005685\|GO:0006376
	Vifa5g01660	398	Pfam	LUC7 N_terminus	2	160	IPR004882	GO:0003729\|GO:0005685\|GO:0006376
	Vifa5g01660	398	Coils	Coil	212	232	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g01660	-		-	gmx:100793888	505.753

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa5g01660	5	489062177	489067257	Vifa5g01660	5	489062177	489067257	ECH