Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01656 ATGGCTATGGCTGGGCTTCTACCAAAAGGAATAACTCGGTATCAGATCAATGGTACCAGTGGAGAATTTCAGGTTTGGATGGAAGAACCGTGTAATGCAAAGTTTGAAAACGAGGTTCACTATGATCCGAACATTAAGGGTACCCTAAATTATGGTAAGATCGGGGAATTATCTGGTATGACTGCTCAGGAACTCTTCCTATGGTTCCCTGTTAAGGGCATTCGTGTTGATCTACCTAGCTCTGGTCTCATTCACTTCGATGTTGGTGTTGCTGATAAACAATTCTCTTTGTCCCTCTTTGAAGATCCTCCTGATTGTAACCCTCAGGTTAATGCTGATAATGATGATGTGTTGAGGGCAGTTTGGTAG 369 0.4282 MAMAGLLPKGITRYQINGTSGEFQVWMEEPCNAKFENEVHYDPNIKGTLNYGKIGELSGMTAQELFLWFPVKGIRVDLPSSGLIHFDVGVADKQFSLSLFEDPPDCNPQVNADNDDVLRAVW 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01656 122 SUPERFAMILY At5g01610-like 5 107 IPR036758 -
Vifa5g01656 122 FunFam Uncharacterized protein At3g07460 2 111 - -
Vifa5g01656 122 Pfam Protein of unknown function, DUF538 4 101 IPR007493 -
Vifa5g01656 122 Gene3D - 4 111 IPR036758 -
Vifa5g01656 122 PANTHER T31J12.3 PROTEIN-RELATED 4 106 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01656 Vifa-Chr5 487689170 487690251 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01656 - - gmx:100778787 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01656 5 487689170 487690251 Vifa5g01656 5 487689170 487690251 ECH