Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01599 ATGGCGAGTAACAATCACCACCGTTTAGACTCTTCCGGCAGTGACATTTCAGTTTATGTAGACGCAGACGCTACTCCTTCAGGGTGTGTTGACAGGGATTCATCAATTGCGTCGCAAAATGTTGTGGCTGAACCGTCGAATCACAGTAAGAAAGATGCTAAAGTTGGAAAGTACAGTGGATTATTGGCTAAGTTCTTTGATGAGAATGTTCCTTTCAAGAAAAGGCTGAGATGGTTAAAAAAAGCTTCAATGGTTAAGGATGACGGTACTGTAGAAATTGATGTTCTGGGACATATTAAAGCTCAGTCTCCAGAAAATAGTTTTGAGCCTTGCAACGAAACATTCGATGAGGATATTCAACCTATCCGACCGCAACAAATTGCAATGCTTATAGTTGGTACACGGGGAGATGTCCAGCCATTTGTTGCCATTGGGAAGCGTCTGCAGGCAGACGGCCACAGGGTTAGGCTTGCTACTCATAAAAATTTTGAAGATTTTGTCTTGAAAGCAGGCTTGGAGTTTTACCCTTTAGGAGGAGACCCCAAAGTTCTTGCAGGGTATATGGTCAAGAATAAAGGCTTCTTGCCATCAGGACCTTCAGAAATACAATTACAAAGAAGTCAAATCAAGTCTATTATTCACTCTCTGCTTCCTGCATGCAACAGCCGGTACCCAGACTCAAATGAACCATTTAAAGCAGAAGCTATAATTGCAAACCCTCCAGCATATGGGCATACTCATGTTGCTGAGTATCTAAATGTTCCGCTGCACATATTCTTCACAATGCCATGGACGCCTACTAATGAATTTCCCCACCCTCTTTCCCGAGTTAGGCAGCCGATTGGATACAGACTGTCTTATCAAATAGTTGATGCTTTAATCTGGCTTGGAATACGAGATTTGATAAATGAGTTTAGGAAGAAGAAGCTGAAGCTAAGAGCTGTTACTTATCTACGTGGATCTTACACTTCCCCTCCTGATATGCCCTATGGTTATATTTGGAGCCCCAACTTGGTCCCTAAACCAAAAGATTGGGGACCTAACATTGACATTGTTGGATTTTGTTTCCTTGACCTTGCTTCAAATTATGAACCACCAAAACCGCTGGTAGATTGGCTTAAAGAAGGAGACAACCCTATCTATATTGGATTTGGTAGCCTCCCTCTACAGGAACCCGAAAAAATGACAAGAATTATAGTTCAAGCTCTGAAACGAACAGGGCAGAGAGGTATTATCAACAAAGGGTGGGGTGGTCTTGGGAATTTGGCAGAACTAAATAAATCCAAATCTGTGTACTTACTGGACAACTGTCCGCATGATTGGCTATTTCCACGATGCACTGCTGTGGTACATCACGGGGGAGCTGGAACAACTGCTGCTGGTCTTAGAGCTGAATGCCCAACCACTATTGTACCATTCTTTGGGGACCAGCCATTTTGGGGAGAGCGGGTGCACGCCAGAGGAGTAGGTCCCGCACCCATCCCAGTAAAGGAGTTTACATTGGAAAGGCTGGTTGATGCCATACGTTTTATGCTGAATCCAGAGGTGAAAATGCGGGCTGTTGAACTTGCCAGTTCCATGAAAAACGAAGATGGGGTTGTGGGAGCAGTTAATGCCTTCTATAAACATTATCCGCGCCAAGATCCTGATGCTATGGCTGAGTCCAAGCCAGTAGCCTCGGTACATAAACAGTTATCTATATGCGAATGCTTTGGTTGCTACAAGTCTTCTAATTAA 1737 0.4375 MASNNHHRLDSSGSDISVYVDADATPSGCVDRDSSIASQNVVAEPSNHSKKDAKVGKYSGLLAKFFDENVPFKKRLRWLKKASMVKDDGTVEIDVLGHIKAQSPENSFEPCNETFDEDIQPIRPQQIAMLIVGTRGDVQPFVAIGKRLQADGHRVRLATHKNFEDFVLKAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIQLQRSQIKSIIHSLLPACNSRYPDSNEPFKAEAIIANPPAYGHTHVAEYLNVPLHIFFTMPWTPTNEFPHPLSRVRQPIGYRLSYQIVDALIWLGIRDLINEFRKKKLKLRAVTYLRGSYTSPPDMPYGYIWSPNLVPKPKDWGPNIDIVGFCFLDLASNYEPPKPLVDWLKEGDNPIYIGFGSLPLQEPEKMTRIIVQALKRTGQRGIINKGWGGLGNLAELNKSKSVYLLDNCPHDWLFPRCTAVVHHGGAGTTAAGLRAECPTTIVPFFGDQPFWGERVHARGVGPAPIPVKEFTLERLVDAIRFMLNPEVKMRAVELASSMKNEDGVVGAVNAFYKHYPRQDPDAMAESKPVASVHKQLSICECFGCYKSSN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01599 578 Gene3D Glycogen Phosphorylase B; 356 527 - -
Vifa5g01599 578 Gene3D Glycogen Phosphorylase B; 127 532 - -
Vifa5g01599 578 CDD GT1_Gtf-like 127 543 IPR002213 GO:0008194
Vifa5g01599 578 Pfam Glycosyltransferase family 28 N-terminal domain 127 271 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vifa5g01599 578 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 127 542 - -
Vifa5g01599 578 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 64 550 - -
Vifa5g01599 578 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 366 524 IPR002213 GO:0008194
Vifa5g01599 578 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 358 527 - -
Vifa5g01599 578 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 127 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01599 Vifa-Chr5 466150910 466158449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01599 63 573 Glycosyltransferase AT3G07020 69.305 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01599 K05841 - gmx:100779695 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01599 5 466150910 466158449 Vifa5g01599 5 466150910 466158449 ECH