Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01596 ATGTTAGGCAACAAGGTACTTCTAACCTACAAAAGAAAACGGAAATCTCAAAGTGGCTGTTTCATCCATGGAAATCGTGGCCAAAATTCAAAAAACATGAAGAAAAGTCAATGGATACTAGTGATGGAAAAAAAGCCGTGCTTTGGAAGCATCAAACAGCCGGATGAGTCATCACCACTTCCAGTTCAAAAGTCAGGTGGTCTGGAAGCAGAGCAGCTTGGAAATCATGATGAAACAGAGAGGGTAATTACTACGAAGGAATCATCTTTAACGAAACATCCATGTGAGAATAACTCGAAGAAGGATGTTGATGAATTACCCCCAATAACGAAGCCTTCGCAGAATGATTGTGACGCACAGAAAAATTCTTCTGGAGGTGAAAACTATGGCATTGAATGTGACGATGGTTCTAATAAAAACAATATTCCACCCTCAGTTGAATTGGATGCTAGGAATGATTTCAATGTAATCAACTCAGAAGCATCAATTACAAGAGAAATCAGTGCTGCATGTGGCGATGAATCTCTTGTTTTGAATAAGTCAGCAGATAGACTTACCGAGTCTCCCTCCAAAGATAATTTCGGGAGCCAATCTGAACGTAAGGAAAACATTCCAGTTCTAGCCAAGTGGAGCATGCTTGCAAATGCTAATCCCTCTTCTAGTGACGGATCATCTTGTGACGAGTGTCCTGTAAACAATGTACCTGACCTTAATCAAACTCAGACACAAGATGTTACATCTTCTAGAAGCTGTTCTAGGAGTTTTCCAACAGACCTTAATCTATCGGCAGAGCTTTCTGAAAGAGGGGAGCTTCATCAGACTCTAGAAAAGGTGAGAAATGCTGACACTCCATGTACTAGTGGAGTTGTTTCTGAAACCTGTATGGCAAACGCGGGAGAGCAACTGCATCATGGAGAAGACATAGTGAAAACTGACACTCACATGGCTGGAACAGAAGTTCCAAGCCAGAGTTCTCTGGTGCACAAGGAAGTCCAACATCTTGAGAAGGATTGCCAAGGAATCTCTATCATTGATGATTCTAGAGATCTCTGTCCTGGTTCAGCAACTGCTAACCAAGAACTAGAGGAGTTCCAACCCTCAGTGAAAGGGCACCAACCTCAGAGTAGTGACCTGCCCCCTAACTCTGCAGAAGAGCACACTGTTGAATTGAACCTTGGTGCTGACAAGCATTCCCTTCACCTGGGGACGAAAAATCTTGTAGCCAAATCTGACTCTACAAGCAGTAGATCTGCCATTGTTGAAAATCAAGTAACTCAGCTGGAATTTTTAAGCTCTAGCAATACAAAGCTGATTTCAGAAGGAAAGACCATTGATGACGTCTGTTCAAGTATTACTCAATCTCAGTCAGGTTGTTGCATAATGTTGGATGAAAGAACGAATGTTCAAGAAACTAAAACTAATAATTTAAAGCACGTGCCAAACATTTCTCTTTCTTTGGGTTTGTCTCTACCTACGGAGCTTGAAACTGGAGGTTGTGATTCCTCTAACTGTTTTCCTACATTGCCTCTTTTTAATTTAACCGCCGGAACTAGAGATGTTGTCCAAGATGGATTATGTCAGTCTTCAACAAACCGGAAACCATTGCTTCTCAGACACAAGGCATTGCTTGACAACATCATAAGCAAAACAAGAGCTTTAAACGAAAGAGGTAACTTTCAAGAAAATCTCAAGCCACACCCTATAATGTGGTCTGAAGAGGAATTGGATTTTCTCTGGATTGGTGTGAGGAGGCACGGTAGGGGAAATTGGGATGCTATGCTTAGGGATCCAAGATTGCGGTTTTCACCATTAAGGAAACCATGGGACCTTGCTGAGAGGTGGGAGGAGGAACAATCAAAACTTCTGAAAGATATTAGTGTTCCACACTTCATGCATCCAAATGCAGAGAGGGCGGCAGCAGAAGCAGCAATGCAAGGAAACTTTTACTTCGTAGATCCCAAATCAGGTCCTTGGAGACAAAATCCAATAGAGGAGACTAATCTATCACCTGAAGATGTATTTTCTTATAAGGAAAGAAACCACTCGAAGAAATCTCTTGCCATGCCATTTCTTGGAAGTAACCACGCTGCACGCGGTCCTGCGCCAATGATTCATTCCAGAAGAACTTCTTACAACAGCAACATGGATAAGTATGAATTGGGATTTTTCAATTCTCCAGGAAGCTTGAGTATTTCCAAGGAAAATTCTTATTTAGATGATTACCCATTTAATTGTTCAAATGCAAAGAATAATTTGCCACTCTGGCTTAGAGAAGCTATCAATACTCCTCCAATGTCCAGAGAGCCAAATGCGTCTGCAGAGCATTGCTTTGATGCTGGTGGTAGTAAGGCATGCTTTCTGCCTCAAAGTCAGTCGAGTGCTTTGAAGACAAATGACGTATCCGTATCAAATGCTTCTCACTCCTCAACTTATTCAAGAACAAAATATGGGATGCTGAAAATGAACAAGCATCTTGAACATCATGCCAGAAAACAAGATGACTTGATTGTTATTGATAGTGACACATCTTCTGAAGAGACTGTATCTGACGATCACCGTGCCAGCATGAAGATTTGA 2577 0.416 MLGNKVLLTYKRKRKSQSGCFIHGNRGQNSKNMKKSQWILVMEKKPCFGSIKQPDESSPLPVQKSGGLEAEQLGNHDETERVITTKESSLTKHPCENNSKKDVDELPPITKPSQNDCDAQKNSSGGENYGIECDDGSNKNNIPPSVELDARNDFNVINSEASITREISAACGDESLVLNKSADRLTESPSKDNFGSQSERKENIPVLAKWSMLANANPSSSDGSSCDECPVNNVPDLNQTQTQDVTSSRSCSRSFPTDLNLSAELSERGELHQTLEKVRNADTPCTSGVVSETCMANAGEQLHHGEDIVKTDTHMAGTEVPSQSSLVHKEVQHLEKDCQGISIIDDSRDLCPGSATANQELEEFQPSVKGHQPQSSDLPPNSAEEHTVELNLGADKHSLHLGTKNLVAKSDSTSSRSAIVENQVTQLEFLSSSNTKLISEGKTIDDVCSSITQSQSGCCIMLDERTNVQETKTNNLKHVPNISLSLGLSLPTELETGGCDSSNCFPTLPLFNLTAGTRDVVQDGLCQSSTNRKPLLLRHKALLDNIISKTRALNERGNFQENLKPHPIMWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPLRKPWDLAERWEEEQSKLLKDISVPHFMHPNAERAAAEAAMQGNFYFVDPKSGPWRQNPIEETNLSPEDVFSYKERNHSKKSLAMPFLGSNHAARGPAPMIHSRRTSYNSNMDKYELGFFNSPGSLSISKENSYLDDYPFNCSNAKNNLPLWLREAINTPPMSREPNASAEHCFDAGGSKACFLPQSQSSALKTNDVSVSNASHSSTYSRTKYGMLKMNKHLEHHARKQDDLIVIDSDTSSEETVSDDHRASMKI 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01596 858 MobiDBLite consensus disorder prediction 182 202 - -
Vifa5g01596 858 CDD SANT_TRF 568 614 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 364 386 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 71 107 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 364 382 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 113 127 - -
Vifa5g01596 858 SUPERFAMILY Homeodomain-like 567 616 IPR009057 -
Vifa5g01596 858 Gene3D - 535 627 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 215 256 - -
Vifa5g01596 858 MobiDBLite consensus disorder prediction 49 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01596 Vifa-Chr5 465359363 465363511 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01596 - - tpra:123888194 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01596 5 465359363 465363511 Vifa5g01596 5 465359363 465363511 ECH