Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01581 ATGAAGAAGTTTGTGCTCAAATTAGATTTGGAAGATGATAAGGCAAAACAGAAAGCCTTGAAGACAGTTTCAACACTTTCAGGGATTGATGCCATCACCATGGACATGAAGGAGAAGAAATTAACAGTGGTAGGAATTGTGGATCCAGTAAAAATAGTGAGCAAACTTCGAAAATATTGGCAAGCGGATTTAATCTCGGTAGGACCGGCGAAGGAGCCAGAGAAGAAAGAAGAGCCAAAGAAAGAAGAACCAAAGAAAGAAGAAGAGAAGAAAGAAGAGGGAAAGAAGGAGGGAGAGAAGAAAGAAGAGGAAAAGAAGGAAGAACCGAAGAAAGAAGAAGAGAAGAAAGAAGAGGGAAAGAAGGAGGAAGAGAAGAAAGAAGAGGAGAAGAAGAAAGAGCCAGCACCAGCACCTGACCCTGTTTTAGAAATGGTGAAGGCTTATAGGGCTTATAATCCTCACATGACAACATATTATTATGTTCAAAGTATGGAAGAGAATCCCAATGCTTGTGTGATTTGTTGA 525 0.4019 MKKFVLKLDLEDDKAKQKALKTVSTLSGIDAITMDMKEKKLTVVGIVDPVKIVSKLRKYWQADLISVGPAKEPEKKEEPKKEEPKKEEEKKEEGKKEGEKKEEEKKEEPKKEEEKKEEGKKEEEKKEEEKKKEPAPAPDPVLEMVKAYRAYNPHMTTYYYVQSMEENPNACVIC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01581 174 Coils Coil 110 133 - -
Vifa5g01581 174 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 171 - -
Vifa5g01581 174 MobiDBLite consensus disorder prediction 69 137 - -
Vifa5g01581 174 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Vifa5g01581 174 Coils Coil 86 106 - -
Vifa5g01581 174 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Vifa5g01581 174 Gene3D - 1 72 - -
Vifa5g01581 174 MobiDBLite consensus disorder prediction 64 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01581 Vifa-Chr5 458313530 458315064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01581 - - gmx:100527231 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01581 5 458313530 458315064 Vifa5g01581 5 458313530 458315064 ECH
Vifa5g01581 5 458313530 458315064 Vifa4g00941 4 274322496 274323770 PCT