Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01197 ATGGCAGGCCCAATGAGACCTCAAATTGTGCTATTTGGCTCTTCTATAATTCAGATGAGTTTTGATAATGGTGGTTGGGGTGCTATTCTAGCTAATTTGTATGCAAGAAAGGCCGATATAGTGTTGCGGGGATACTCAGGTTGGAATTCAAGACGTGCTTTGGAAGTTCTTGATGAAGTTTTCCCAAAGGATGGTTATTTGCAACCATCATTGGTTATTATCTACTTTGGTGGAAATGATTCCATTCACCCTCACCCATCTGGTCTTGGTCCTCATGTTCCTATTGAAGAATATGTTGAAAACATGAGAAAAATTGCTAACTACCTTAAGAGCCTCTCAGATCATATCCGCCTCATATTTCTCACCTCTCCTCCCATCAGTGAAGTACAAATCAGGAAGAAACTCAGTGCAACACAATCTGGAAGAACCAATGAACATTGTGGAATATATGCAAGGGGGTTGGTGGAGCTATGTGATGAGATGAAGTTAAAAGTCATTAATCTTTGGTCTGCAATCCAGCAAAGGGAAGACTGGTTAGATGTCAGTTTTACGGATGGAGTTCATTTATCAGCTGATGGAAGTCAAGTAGTTTTGAAGGAAATATTAAAGGTACTTAGAGAAGCTGATTGGAAACCTAGTTTGCATTGGATGTCATTACCAACTGAATTTGCTGAAGATTCACCTTATTACCCTCCAAGTCCAGATGGAACCACCACTATAAATGTGTCTTACAGTATTCCACGAAGGCATTTGCAATGGGACCTATAA 768 0.401 MAGPMRPQIVLFGSSIIQMSFDNGGWGAILANLYARKADIVLRGYSGWNSRRALEVLDEVFPKDGYLQPSLVIIYFGGNDSIHPHPSGLGPHVPIEEYVENMRKIANYLKSLSDHIRLIFLTSPPISEVQIRKKLSATQSGRTNEHCGIYARGLVELCDEMKLKVINLWSAIQQREDWLDVSFTDGVHLSADGSQVVLKEILKVLREADWKPSLHWMSLPTEFAEDSPYYPPSPDGTTTINVSYSIPRRHLQWDL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01197 255 CDD Isoamyl_acetate_hydrolase_like 8 205 - -
Vifa5g01197 255 Pfam GDSL-like Lipase/Acylhydrolase family 11 195 IPR013830 -
Vifa5g01197 255 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 4 254 IPR045136 -
Vifa5g01197 255 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 6 236 - -
Vifa5g01197 255 Gene3D SGNH hydrolase 6 229 IPR036514 -
Vifa5g01197 255 SUPERFAMILY SGNH hydrolase 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01197 Vifa-Chr5 346538392 346540863 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01197 K23978 - gmx:100792188 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01197 5 346538392 346540863 Vifa2g05338 2 1588311842 1588313768 PCT