Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00559 ATGGCTTCCTTGTCTTTCACTCCTCACCCACTCGCCTCCTTCGTTGCTTCTAACAAATTCCGGTTCGGTACCGGTTCGGAGTTCCAGGTTCAGAAGAATCAAAAACTCAGTTTCACCGTCTGTAGAGCTGGTTCTTCTTCTATAGCCTTTCGTCACCTCGATGCTGATGATTTCCGTCATCCTCTTGATAAACAGAATACGCAGATGCTGAGAGCCATTCCGGGATTGAATCAACTCGGAAAAGCTCTTCTAGGAACTGTAACTGAGCAGGTTATGTTCCTTGAGAATATAGGAACATCTGTCCTTGTCTCCAAAAACCAGCTTTCTGATCTTCACGACTTAATGGCGGAAGCTGCTGAAATATTAAATGTCAGTGCCCCTGATCTATATGTTCGTCAAAGTCCTGTGCCAAATGCATATACATTAGCGATAAGTGGTAAACAACCGTTCGTTGTTATTCACACAAGCCTAGTGGAGCTTCTGACAAGAGCAGAGTTGCAGGCTGTTTTGGCTCATGAGTTGGGTCACCTAAAATGTGATCATGGCATGTGGCTTACATATGCAAATATTCTAACCCTTGGAGCCTATACTGTTCCTGGCATTGGAGGTATTATAGCTCAGACACTGGAAGAGCAGATACTTCGCTGGCTTCGAGCAGCTGAGTTAACTTGTGATCGGGCAGCTCTTCTCGTTGCTCAAGACCCTAAAGTTGTCATCTCCCAAGCTCGATCTTATGAAAAAGCTGCTTCCAGCCCTGTTGGATGGTACATAAGGAATGCTCAAACAAGGCAACTTTCACATCCTCTTCCTGTTCTACGGGCTAATGAAATTGATGAGTGGTCAAGAAGTTCAGCTTACAAATCTCTTTTGAAACGTGGAATACCTATCAGATCACAACAACAGAAATTGTAG 912 0.443 MASLSFTPHPLASFVASNKFRFGTGSEFQVQKNQKLSFTVCRAGSSSIAFRHLDADDFRHPLDKQNTQMLRAIPGLNQLGKALLGTVTEQVMFLENIGTSVLVSKNQLSDLHDLMAEAAEILNVSAPDLYVRQSPVPNAYTLAISGKQPFVVIHTSLVELLTRAELQAVLAHELGHLKCDHGMWLTYANILTLGAYTVPGIGGIIAQTLEEQILRWLRAAELTCDRAALLVAQDPKVVISQARSYEKAASSPVGWYIRNAQTRQLSHPLPVLRANEIDEWSRSSAYKSLLKRGIPIRSQQQKL 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00559 303 FunFam Peptidase M48 family protein 101 189 - -
Vifa5g00559 303 CDD M48_Ste24p_like 97 279 - -
Vifa5g00559 303 PANTHER CAAX PRENYL PROTEASE 1 86 241 - -
Vifa5g00559 303 Pfam Peptidase family M48 109 280 IPR001915 GO:0004222|GO:0006508
Vifa5g00559 303 Gene3D Metalloproteases ("zincins"), catalytic domain 101 189 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00559 - - mtr:25497914 473.781
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00559 5 125975706 125979983 Vifa5g00559 5 125975706 125979983 ECH