Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00315 ATGGAAGAAGAGGAAGACATTTCTTCACCCTTCTGGCTGCAAAACAGCAGCACCAACCGCCGCCGTCTCCGCCGCTCATACTCTATATTCCTCAGCTCCAGTACGGTTGTAATAATCCTTCTAGTAATTACACTTGCATTCATCTTAGTCATAGTTCCTACATTGCACTCTTTCATTTCCCACATTTGCAAACCCAATTCTGTGAAAAAGAGTTGGGATTCTCTCAACCTTTTTCTTGTTCTTTTTGCCATATTTTGTGGCTTCCTTAGCAAAAATAATAACAACAACAACGAAAGTCCGCGTTCCTATGAAGATGAAACCTTTTCAAACTCAAACACTCGAGAAGAGTACGAGAAACCAAACTCAGAAACAGAAACACAACCACATTCATGGTATGAGTACTCAGAAAATAGAACTCCATATAACAGGTTGAGGAGTTTTAACTCCTACCCGGATCTCAGGCAAGAGTCATGGTGGGTCACCGGAGATGAACGATGGCGATTTAGTGATGATACTCGGGTTAATGGTTATAACCGTGGATTGGACTTAAACTTGAAAGAAGAAAAAGAAGACACAAGCATCAAGAGTGTTGAAGTGAACACATCTTTGAAAGGAAAGAACAAGAAGGAAACATTAGAAACACAAGTGAACAGATCTTTGAAAGGAAAGAACAAGAAGAAGCAAGCATTAGAAACACATCAATCTGATACGATTGAGAAATTGAAAAATAACAATGTTGCAGAAAGAAAGAATAAAAAGGATGAGAATACGTATCAATCTTTGAAAGGAAAGAAGAAGAAGCAGCATAAGCATAAAAGCGTTGAAAATTTTCAAAGCCTTCTGAATTCTAAACCTCCTACTACCATGCCTTCTTCTTCATCTTTTGATGATTTGTTCTATTCCAAGAAAAACAAACAGAAGAAACATAAGTCTGTTTCACCGCCACAATATCATGTTTCATCCACGATTGTGTCAAAAATAAAAGATGAGGATTTTTCTATAACTATCGGTAATGAGTCGCCTTTGACCTCAATACCTCCACCACCTCCTCCTCCACCACCGTTCAAGATGCCGGCGTGGAAGTTTAAGGTACAGGGCGACTTTGTTAGAATAGATAGTATTAGTAGTACAAGTAGTGGTTTGGCAGATATAGATGATGATGAAATATTGGAGGTAGCAGATCCTGGAATTGATCTATTGGTGTATCCCAATACCAACCCAGATGTTGATAACAAAGCTGGTAGTTTTATTGAAAGTTTCAGGGCTGGTTTAAGGAAGGAGAAAATAAATTTCATGAAGAATCAAGGGATAGGGGATTGA 1320 0.3856 MEEEEDISSPFWLQNSSTNRRRLRRSYSIFLSSSTVVIILLVITLAFILVIVPTLHSFISHICKPNSVKKSWDSLNLFLVLFAIFCGFLSKNNNNNNESPRSYEDETFSNSNTREEYEKPNSETETQPHSWYEYSENRTPYNRLRSFNSYPDLRQESWWVTGDERWRFSDDTRVNGYNRGLDLNLKEEKEDTSIKSVEVNTSLKGKNKKETLETQVNRSLKGKNKKKQALETHQSDTIEKLKNNNVAERKNKKDENTYQSLKGKKKKQHKHKSVENFQSLLNSKPPTTMPSSSSFDDLFYSKKNKQKKHKSVSPPQYHVSSTIVSKIKDEDFSITIGNESPLTSIPPPPPPPPPFKMPAWKFKVQGDFVRIDSISSTSSGLADIDDDEILEVADPGIDLLVYPNTNPDVDNKAGSFIESFRAGLRKEKINFMKNQGIGD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00315 439 PANTHER COTTON FIBER (DUF761) 9 430 - -
Vifa5g00315 439 MobiDBLite consensus disorder prediction 96 130 - -
Vifa5g00315 439 Coils Coil 244 264 - -
Vifa5g00315 439 MobiDBLite consensus disorder prediction 278 297 - -
Vifa5g00315 439 MobiDBLite consensus disorder prediction 108 123 - -
Vifa5g00315 439 MobiDBLite consensus disorder prediction 243 273 - -
Vifa5g00315 439 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00315 Vifa-Chr5 50225339 50226658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00315 - - psat:127087309 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00315 5 50225339 50226658 Vifa4g01308 4 390408916 390410679 PCT