Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00221 ATGGCACCTCATGGAGATTCATTACCTAGCTCATTCTCTAGAACCAACAACAAAGTATGCTCCAAACCACCAAAACCTAACTCATCCGATCACAACAACAACAATAACAACATTCAAAGAACAATCTCAGACATATCATTCGCGTTATCAAAAGAAGACTTTGATTTATCACTTCCACCAATAACCGAAGTTGAAGATGCAAAGTGTGAGTGCTGTGGCATGTCGGAAGAGTGTACACCTGAGTACATAAAATGCATACGCGACAAATACTTAGGAAAATGGGTTTGTGGTTTGTGTTCTGAGGCAGTGAAAGAAGAGTTGGAGAAAAATGGAGGGAACAAAGATGAAGCTTTGAGTGAACACATGAATGCATGTGTTAGGTTTAACAAATTTGGAAGGACTTTTCCTGTTTTGTTTCAAGCTGAAGCTATGAAAGAGATGCTGAAAAAAAGTAAAATGGAAGGTAGAAGGGCTAAGTCATTCAACCCTAGAGAAAAAGGTGGGGGTGGTGAAAAGAAAGGTGGACTTGCTAGAAGTTCAAGCTGCATTCCTGCTATCACAAGAGATATCAATGATTTCAAAATTTCAAGTTAA 594 0.3872 MAPHGDSLPSSFSRTNNKVCSKPPKPNSSDHNNNNNNIQRTISDISFALSKEDFDLSLPPITEVEDAKCECCGMSEECTPEYIKCIRDKYLGKWVCGLCSEAVKEELEKNGGNKDEALSEHMNACVRFNKFGRTFPVLFQAEAMKEMLKKSKMEGRRAKSFNPREKGGGGEKKGGLARSSSCIPAITRDINDFKISS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00221 197 PANTHER OS01G0745000 PROTEIN 61 188 IPR012876 -
Vifa5g00221 197 MobiDBLite consensus disorder prediction 1 37 - -
Vifa5g00221 197 Pfam Protein of unknown function (DUF1677) 64 150 IPR012876 -
Vifa5g00221 197 MobiDBLite consensus disorder prediction 8 37 - -
Vifa5g00221 197 MobiDBLite consensus disorder prediction 151 180 - -
Vifa5g00221 197 MobiDBLite consensus disorder prediction 151 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00221 Vifa-Chr5 30005797 30006390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00221 - - gmx:100785884 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00221 5 30005797 30006390 Vifa5g00221 5 30005797 30006390 ECH
Vifa5g00221 5 30005797 30006390 Vifa4g01438 4 424694794 424695366 PCT