Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04995 ATGGCATACACCGAATCCGATTCAGCTCTTCTTCTACCATCAGGCTCCGGCACAAAGGAAAAAGCACCAGAAGACAAATGGCATTTAGCGTACATGATCTATTTCTTCCTTGGGTTTGGTTATCTTCTTCCATGGAACGCATTCATCACTGCCGTTGATTACTTCTCTTACCTTTACCCTGATGCAAGCGTTGATCGAATCTTCGCCGTTGTTTATATGGTCGTTGGTCTCTTTGGGCTTACGCTTATTATTCTGTATAGACACAAATCTCATGCCTATGTTAGGATTAACATGGGTCTTCCTCTATTTGTTGTTTCGTTGCTTGTTGTTCCTTTGATTGATGCTTTTTATGTTAAGGGTCGGGTCGGGTTTTATGGTGGGTTTTATGTTGCTGTCGGAGCGGTTGGGGTTGCTGGTGTGGCGGATGCTTTGGTGCAGGGATCTATTGTTGGCTCTGCCGGGGAGTTGCCGGAGAGGTACATGCAAGCTGTCATCGCTGGCACTGCTGCTTCTGGGGTCGTTGTTTCTTTCCTAAGGATATTTACAAAAGCTGCTTACACACAAGATGTCTCTGGCTTACAGAAGAGTGCAAATCTCTACTTTGGTGTATCAATTGTGATTATGTTCATATGCATGGTTTTATACAGTTTAGTAAACAAACTTCCCATTATGAAGTACTATGATGAAATTAAGATTCAGGCAGTTGCGGTGGAAGACGACACCGGTCCTTCGACTGGATCCGTATGGAGGTCGACTGCATGGGAAACTGTTGGAACAATCAAGTGGTATGGATTTGGCTTGATACTCATTTATGTTGTGACTCTTGCGATATTTCCCGGCTACATTACAGAAGATGTTCACTCTGAACTTCTCAAAGATTGGTATCCAATTCTCCTTATCACTTGCTTTAATGTGTTTGACCTTGTTGGCAAAAGCTTTACTGCAGTATACCTTCTGGAGAATGCAAAAATTGCTATAGGATGTTGTGTAGCAAGACTCTTGTTTTTCCCTCTCTTCTTAGGTTGCTTGCATGGTCCGAAATTCTTCCGGACGGAGATTCCTGTCACGATACTGACTTGTGTTTTAGGGCTCACAAATGGATATCTTACGAGCGTATTGATGATTTTAGCTCCTAAAACTGTCAAGTTGCAGCATGCAGAGACTGCAGGGATTGTGAGTGCATTGTTCTTAGTTGTTGGTCTTGCTTCTGGGTCTATAATAGCTTGGTTTTGGGTCATATGA 1242 0.43 MAYTESDSALLLPSGSGTKEKAPEDKWHLAYMIYFFLGFGYLLPWNAFITAVDYFSYLYPDASVDRIFAVVYMVVGLFGLTLIILYRHKSHAYVRINMGLPLFVVSLLVVPLIDAFYVKGRVGFYGGFYVAVGAVGVAGVADALVQGSIVGSAGELPERYMQAVIAGTAASGVVVSFLRIFTKAAYTQDVSGLQKSANLYFGVSIVIMFICMVLYSLVNKLPIMKYYDEIKIQAVAVEDDTGPSTGSVWRSTAWETVGTIKWYGFGLILIYVVTLAIFPGYITEDVHSELLKDWYPILLITCFNVFDLVGKSFTAVYLLENAKIAIGCCVARLLFFPLFLGCLHGPKFFRTEIPVTILTCVLGLTNGYLTSVLMILAPKTVKLQHAETAGIVSALFLVVGLASGSIIAWFWVI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04995 413 PIRSF ENT 4 413 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa4g04995 413 Pfam Nucleoside transporter 134 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa4g04995 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 133 153 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa4g04995 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 299 320 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa4g04995 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 389 413 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa4g04995 413 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 19 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04995 Vifa-Chr4 1569496823 1569498294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04995 7 413 Organic Solute Cotransporters AT1G70330 64.878 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04995 K15014 - gmx:100802339 629.402