Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04994 ATGATGAGAACGCTGTCTCAGACATTTCGGTCCGTTAAACGCCCAATTCCAAACCCTAAATCATCCAAATCATCATCCCCTACAAAATCAGAATCCAAAATCAACGCCAAACCAAAATCAGACTCATGGTGTGTTTATCTCATTCTCTCCACCAACCTCCCAATCAAAACTTACGTTGGCGTCACAACCAATTTCCCTCGCCGTTTAAGACAGCATAATGGTGAACTTAAAGGCGGTGCGAAAGCTTCCCGTGCTGGAAGGCCATGGATTTGTGCATGTATTGTTTGTGGCTTTGCAGACCGAAGTGAAGCTTGTATATTTGAATCAAAGTGGAAAGCTTTGACAAGGAGACTTCCACGCAAAAATCAAAATGACGAACCCACCAAGCAAAGCGAAGATCCATCACGCCCACTGCTGCAACACAGACAAGCAGCTTTAAATAGAGTGAAAACCTCACTTGACTGCTCAGACTTAGAAATTAATTGGCATTTGGATCCACTCTGA 504 0.4365 MMRTLSQTFRSVKRPIPNPKSSKSSSPTKSESKINAKPKSDSWCVYLILSTNLPIKTYVGVTTNFPRRLRQHNGELKGGAKASRAGRPWICACIVCGFADRSEACIFESKWKALTRRLPRKNQNDEPTKQSEDPSRPLLQHRQAALNRVKTSLDCSDLEINWHLDPL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04994 167 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 22 155 - -
Vifa4g04994 167 CDD GIY-YIG_SLX1 43 112 - -
Vifa4g04994 167 MobiDBLite consensus disorder prediction 118 138 - -
Vifa4g04994 167 MobiDBLite consensus disorder prediction 1 36 - -
Vifa4g04994 167 MobiDBLite consensus disorder prediction 1 33 - -
Vifa4g04994 167 Pfam GIY-YIG catalytic domain 43 117 IPR000305 -
Vifa4g04994 167 Gene3D - 37 144 IPR035901 -
Vifa4g04994 167 ProSiteProfiles GIY-YIG domain profile. 41 123 IPR000305 -
Vifa4g04994 167 MobiDBLite consensus disorder prediction 118 136 - -
Vifa4g04994 167 SUPERFAMILY GIY-YIG endonuclease 42 118 IPR035901 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04994 K15078 - gmx:100805152 251.906