Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04107 ATGCATATCGTCGCTCCTTTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCATTCCGGTTATTATAGCATGGATTTATTCTGAGATATTGGAGTATCGGAAAAGTTCTTTGATGAAATCTAGGCACTCCGAGATAAACTTAGTTGAATTGAGCAGTGATGTTGTTAAAGATGAAGACAGAGCAGTTTTATTGGAAGCAGGAGCTCAACAACCAGTATCCCCAACTCCAAAAGCTCGAAGTTTATCTACCTCCCCATCAATTATCCGATTCCTCTTGATGGATGAACATTTCCTTATTGAAAACCGTTTGACCCTTAGAGCCATCTCTGAATTTGGTCTTCTTTTGGCTTACTACTATTTGTGTGATCGCACGGATTTCTTTGCTTCATCAAAAAAGAGTTACAATAGGGATCTATTCATTTTCCTCTATTTTCTCCTCATCATAGTTTCTGCAATAACTTCATTTACAATACATCATGACAAGTCACCATTTTCTGGGAAACCCATACTTTACTTAAATAGACATCAGACTGAAGAGTGGAAAGGCTGGATGCAGGTATTGTTTTTGATGTACCATTATTTTGCTGCAACTGAAATCTACAATGCAATCCGTTTGTTCATCGCTGCATATGTTTGGATGACTGGGTTTGGAAACTTCTCATATTATTATATTCGTAAAGATTTTAGCATGGCTAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTGGTATTGTTCTGTTGTGTTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTCGGTATTCTCAACAAGTACAATGAGATTGGGTTAGTCATTGCTGCAAAATTTTTTGCTTGCTTCTTGATTGTTATCTTAGTATGGGAGATACCCGGAGTCTTTGAGTGGCTTTGGAGTCCGTTTACTTTCATGCTCGGTTATACTGATCCTGATCCATCTAAATCACATTTTCCCCGCTTGCATGAATGGCATTTTCGCTCTGGGCTTGATCGCTATATATGGATAATTGGAATGATATATGCTTATTATCATCCAACTGTTGAACGATGGATGGAGAAATTGGAGGAAACTGAATTCAAACGCAGAATATCAATCAAAGCTGCTGTCGTGCTAATATCTTTAGTGATGGGTTATTTTTGGTTTGAGCATATATACAAGCTTGACAAGGTCACTTACAACAAATACCATCCTTATACCTCTTGGATTCCCATAACGGTTTACATATGCTTGCGCAATGTTACACAAAGTTTTCGTAGCTTTTCGCTGACCCTTTTTGCATGGCTTGGAAAGGTTACACTGGAGACTTACATCTCACAGATTCATATATGGTTAAGATCAGGCATTCCAGATGGTCAACCCAAGTTGTTGCTTTCCCTGATTCCAGACTACCCAATGTTGAACTTCCTGCTTACTACTTCTATATATGTTGCAATTTCCTATAGGCTCTTTCAGCTGACCAATACACTGAAAATTGCATTTGTGCCTAGCAAAGATGACAAGCGTCTGCTACACAACATAATTACAGGGACAACAATCTCAGTTGTTTTATATTCATTATCCTTTGCCTTCCTTACGATACCGCAAGTCTTGGTTTGA 1644 0.3881 MHIVAPFTPGQVSFLLGIIPVIIAWIYSEILEYRKSSLMKSRHSEINLVELSSDVVKDEDRAVLLEAGAQQPVSPTPKARSLSTSPSIIRFLLMDEHFLIENRLTLRAISEFGLLLAYYYLCDRTDFFASSKKSYNRDLFIFLYFLLIIVSAITSFTIHHDKSPFSGKPILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSMARFAQMMWRLNFLVLFCCVVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGLVIAAKFFACFLIVILVWEIPGVFEWLWSPFTFMLGYTDPDPSKSHFPRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEFKRRISIKAAVVLISLVMGYFWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNVTQSFRSFSLTLFAWLGKVTLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFLLTTSIYVAISYRLFQLTNTLKIAFVPSKDDKRLLHNIITGTTISVVLYSLSFAFLTIPQVLV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04107 547 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 529 - -
Vifa4g04107 547 Pfam 10 TM Acyl Transferase domain found in Cas1p 105 517 IPR012419 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04107 K03377 - gmx:100794337 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04107 4 1306572556 1306579677 Vifa4g04107 4 1306572556 1306579677 ECH