Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04088 ATGACAAGTTTGAAGTCTCTAACTCTTTTCCTATTCCTTCAAGCTATTTTTCTCTTAATTTCCATACCAACAACTTTCTCCAGAAGCACTTTTCCATCAAAAGATGAAAAACTCTCACTTATAGAAAACACTTGCAAAAAAACACCAAACTACAACATTTGCTTCCAATCTCTCAAAGAAAACTCTGCAAGTTCTGTAGCTGATATAACAGGACTAGCTCAAATAATGGTGAAAGTGATGAAAGCAAAAGCAAATGATGGATTGAATAAGATCCACCGGCTAGAGAGGGTGAGAATTATTGGAGCTAGAAAAGCTTTGAGTTCTTGTGGTGACAAATATAGAGCAATTTTGGTAGCTGATATACCTCAAGCTGTTGAAGCTTTGGAGAAAGGAGATCCAAAATTTGCAGAAGATGGTGCAAATGATGCTGCTAATGAAGCAAGTTATTGTGAGAGTGAGTTTAATGGAAAATCACCACTTACAAAAGAGAACAATGATATGCATGATGTTTCAGTTGTTACTGCAGCTATGGTTAGACAATTACTTTAA 549 0.357 MTSLKSLTLFLFLQAIFLLISIPTTFSRSTFPSKDEKLSLIENTCKKTPNYNICFQSLKENSASSVADITGLAQIMVKVMKAKANDGLNKIHRLERVRIIGARKALSSCGDKYRAILVADIPQAVEALEKGDPKFAEDGANDAANEASYCESEFNGKSPLTKENNDMHDVSVVTAAMVRQLL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04088 182 SMART PMEI_2 36 177 IPR006501 GO:0004857
Vifa4g04088 182 CDD CIF_like 39 181 IPR034087 GO:0004857|GO:0043086
Vifa4g04088 182 FunFam Invertase/pectin methylesterase inhibitor family protein 36 182 - -
Vifa4g04088 182 Pfam Plant invertase/pectin methylesterase inhibitor 39 176 IPR006501 GO:0004857
Vifa4g04088 182 NCBIfam pectinesterase inhibitor domain 11 181 IPR006501 GO:0004857
Vifa4g04088 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 181 IPR035513 -
Vifa4g04088 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 182 IPR035513 -
Vifa4g04088 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04088 Vifa-Chr4 1303099202 1303099750 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04088 - - gmx:100500640 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04088 4 1303099202 1303099750 Vifa4g04088 4 1303099202 1303099750 ECH