Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04075 ATGAATGATATAGTTCTTGATGATTTGGTTGATGACATGTGCAAAAAGACACCAAATTTCGACCTATGCAGCTCAACTATACATTCCAATCCTCAAGCAGGAAAAAGTGACGCAAATGGAATAGCCGTCATTATGGTTAATGGCATTTTACAAAGTGTCACTAATACATTGAGTTTTATACAAGGTCTTGTTAAAGAAACCAAAGATCCTGAATTGCAAAGAAAATATGTGAGTTGTGCTGAGACATACATTCCATTAGAGAAAACCATACTTCCACAAGCAGTTGATTCTATAAACAAAAAAAAAATGGGCTTGCCATATTCTCTATGGGTTATATTGGAAAGGAAATTGATTCTTGTAACAAGCAATTCTCAAATGGTTCACCCTTGA 390 0.3462 MNDIVLDDLVDDMCKKTPNFDLCSSTIHSNPQAGKSDANGIAVIMVNGILQSVTNTLSFIQGLVKETKDPELQRKYVSCAETYIPLEKTILPQAVDSINKKKMGLPYSLWVILERKLILVTSNSQMVHP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04075 129 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 102 - -
Vifa4g04075 129 Gene3D Invertase/pectin methylesterase inhibitor family protein 5 108 IPR035513 -
Vifa4g04075 129 SMART PMEI_2 5 127 IPR006501 GO:0004857
Vifa4g04075 129 NCBIfam pectinesterase inhibitor domain 8 103 IPR006501 GO:0004857
Vifa4g04075 129 Pfam Plant invertase/pectin methylesterase inhibitor 8 83 IPR006501 GO:0004857
Vifa4g04075 129 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 8 104 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04075 Vifa-Chr4 1300130059 1300130448 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04075 - - mtr:11422901 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04075 4 1300130059 1300130448 Vifa4g04075 4 1300130059 1300130448 ECH