Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04056 ATGGATCGGTCGTCATCGGAAAACCTCATACTCGTCAACCGCGAACCAAACGGCATCGCGGTGATCACAATCAATCGTCCCGACGCTCTCAACTCGTTGACTCGGGCGATGAACGTCGACATGGCTCAGGCTTTCAAGAGCCTGGACCGGGATGAATCGGTTCGGGTTATTATATTGACCGGATCGGGTCGATCATTCTGTGCCGGCGTTGACCTCACGGCGGCGGAGGATGTTTTCAAGGGTGATGTTAAGGATCCGGAGAGTGATCCGGTCGTGCAAATGGAGCGGTGCCGGAAACCGATAATTGGGGCGATCAAAGGATTTGCAGTTACTGCTGGTTTCGAGATTGCGCTCGCTTGTGATATTTTGGTTGCGGCTAAGGGAGCCAAATTCATGGACACTCATGCTAGATTTGGGATATTCCCATCGTGGGGTTTGTCTCAGAAGCTTTCCCGTATTATAGGAGTAAATAAAGCTCGGGAGGTTTCTCTTACGGCCACGCCTTTGACTGCAGAGGTAGCTGAAAAGTTGGGTTTTGTGAACCATGTTGTTGAGGAGGGTGAATTGATGAAGAAAAGCAAAGAAATTGCAGAAGCTATTGTGAAAAATAATCAAGATTTGGTGTTGAAGTACAAATCAGTGATAAATGATGGCATTAAGCTTGATCTTGGCCATGCTCTTTCTCTCGAAAAGGAGAGGGGCCATGATTATTATAATGGAATGACCAAGGATCAATTCAAGAAAATGCAGGAATTCATAGCAGGAAGAAGTTCCAAGAAACAGTCCAAACTATAG 795 0.4679 MDRSSSENLILVNREPNGIAVITINRPDALNSLTRAMNVDMAQAFKSLDRDESVRVIILTGSGRSFCAGVDLTAAEDVFKGDVKDPESDPVVQMERCRKPIIGAIKGFAVTAGFEIALACDILVAAKGAKFMDTHARFGIFPSWGLSQKLSRIIGVNKAREVSLTATPLTAEVAEKLGFVNHVVEEGELMKKSKEIAEAIVKNNQDLVLKYKSVINDGIKLDLGHALSLEKERGHDYYNGMTKDQFKKMQEFIAGRSSKKQSKL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04056 264 PANTHER ENOYL-COA HYDRATASE 5 263 - -
Vifa4g04056 264 Pfam Enoyl-CoA hydratase/isomerase 15 239 IPR001753 -
Vifa4g04056 264 CDD crotonase-like 10 200 - -
Vifa4g04056 264 SUPERFAMILY ClpP/crotonase 6 261 IPR029045 -
Vifa4g04056 264 Gene3D - 2 235 - -
Vifa4g04056 264 FunFam probable enoyl-CoA hydratase 1, peroxisomal 7 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04056 Vifa-Chr4 1294198623 1294201081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04056 18 226 Acyl Lipid Metabolism Gene Families AT1G60550 34.862 4.22e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04056 K01692 - gmx:100170725 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04056 4 1294198623 1294201081 Vifa4g04056 4 1294198623 1294201081 ECH