Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04042 ATGGAAGCCAGTACAGAGGTAGTTGAAGATTCCCAAATGGACGTAGATCAATGCGAAGAAGATAAAGCTAAGGAGGAGGAAGATCCATTTCTCAATTTCGTCGATCTAGCAAGATCGGAGCTATTGTCGCTCGAAGATGATTCAAGCCGAGATGATTTTGATACATCTGGATATGGCTGGAGCTGGATCGTATCTCACATTCTCAAAACTTGCATTGCTTATTCAAGCGGTGTCACTCCCGCGATTTTGCTCTCTGAACTCTCTCAGGCATGGAGTGAGCATCGCAGGATTGTTGTACCAAAGAAGAGACTGGAATTAATTAACCATCTCAAGAAAAATAATAGAAGGACGAAGCTTCCTAACACTGTTACGATTGACTCTATTTACGCGAAAAAATTCATTGCTTTGAACAGTGTTTTGGAAGCTGTTATTATCGATGCTTATGTACTTCCAGGCACAAACATCCACATGCTTACATTAGGGGATTATTGGAGCTCTAATATCATAGATCTCTACCTTCACCGTAGATTCTATGACTTGGCAGGCCTGCCAAGTGGAATTCTGAAGAAAGGGAGGGAGGTTCTCCTCACAGGCTGCTACCTCCGAACTACCGCAGAAAGTTCTGGTCATCCACGTCTTTTGCCAACAGAGTATCTCGTGATTCTATTAGACGAGAATCAGGATGATGATGCAATGCTGCTAGGAGCTCAGTTTTGTTCAGACTCCTTCTCTTCAATTTCGCTGGAGGCAGTAAACAATGGGGCTTCTTATTCACTTTATGCCAGGATTGAAAATATTGAATCTGCGGAAATTCGAGGGAATTTTGGGACCTCGCAAAGAAAACAAATTACTCTTGTTGATGGTGATGGTGTTGCATTAAATTTCTTCTTATGGAGCGAGCAGGTTCTCCTTGCCAATCTTTTCAGAGTAGGATGCATGCTTGCCCTGGACAAACCTTACGTTGCCAGTTCTGCAGAGTGTGGTATTCAAACACACGAGGAATTTTGCCTTGAATATGGAAGTGCAACACAATTATATTTGGTGCCTTATATTCAGCATGAAGAACAGGTGTGCTTAACTTTGACACCAAACCGCCATCAAGGTTCAAAGCAAATTGGTTCGTATAATCCCACTCAGGGTCTCAAGGTCTCTCAAGTGAGCTTGCCTTGTGATTCTCAGGGTACCATAGATTTCAGCAATTACCCTTTTCGGTCATTTGTGACTGACCTTCGTGACAAGATGACTGGCATCAGCCTCTATGATACTAGCGGAGAAATCAGGGCAAAGCTTCATTTTACCAGACTTTGGTCATTGGGAAGAGTGAGTCTCGGTCACACGGTATTTATATCTGGCTTGACATGCACAGTGTTGAAACGACAAAAACGTCTGGAATTGTCATGGTTTGAGAATGGCACCGGGGCTTCTTTCATCAATCTCAGTTGTTTACCAGCAATGATCAACTCATCTTGCCTTTATAAAGTATTCCAACTCTCTGATATTTCTAACCAGACTTTCTACGCCCAAGTATGCCGAGTCTGGCTTGTTCCGAATCAATATTATTACGTGAATACAAGATTTTCGCATTCTCTCTGCGGTCACTTTGTCGACGAGAAAACCATGAAATGCAGTTTCTGTCATGTAATTTCTGATGCAGAGGCCGTGCGCTCTTTCCATTTGAAAATTACCCTAGCAGATAAGAGCGCGAAAGTTTTAGCATGGTGCACTGGTCAAACTGCCATGGATTTATTGCAGATATCTCCTGACGAGTTTTGTGACCTTCCTGAGGAAGAACAATTGATGTATCCCTCGTCGTTAGAAAATGAAAAGTTTATGGTTGCATTGGTAAATTGTAAGCGGGAAGGCTGTGTGACATATGACCTTTTGCCGGACAATTCAGTTTCGTGGGAAATCACTCGTGCATACAAGTATGAATAA 1935 0.4258 MEASTEVVEDSQMDVDQCEEDKAKEEEDPFLNFVDLARSELLSLEDDSSRDDFDTSGYGWSWIVSHILKTCIAYSSGVTPAILLSELSQAWSEHRRIVVPKKRLELINHLKKNNRRTKLPNTVTIDSIYAKKFIALNSVLEAVIIDAYVLPGTNIHMLTLGDYWSSNIIDLYLHRRFYDLAGLPSGILKKGREVLLTGCYLRTTAESSGHPRLLPTEYLVILLDENQDDDAMLLGAQFCSDSFSSISLEAVNNGASYSLYARIENIESAEIRGNFGTSQRKQITLVDGDGVALNFFLWSEQVLLANLFRVGCMLALDKPYVASSAECGIQTHEEFCLEYGSATQLYLVPYIQHEEQVCLTLTPNRHQGSKQIGSYNPTQGLKVSQVSLPCDSQGTIDFSNYPFRSFVTDLRDKMTGISLYDTSGEIRAKLHFTRLWSLGRVSLGHTVFISGLTCTVLKRQKRLELSWFENGTGASFINLSCLPAMINSSCLYKVFQLSDISNQTFYAQVCRVWLVPNQYYYVNTRFSHSLCGHFVDEKTMKCSFCHVISDAEAVRSFHLKITLADKSAKVLAWCTGQTAMDLLQISPDEFCDLPEEEQLMYPSSLENEKFMVALVNCKREGCVTYDLLPDNSVSWEITRAYKYE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04042 644 Pfam Cell division control protein 24, OB domain 3 413 605 IPR035203 -
Vifa4g04042 644 MobiDBLite consensus disorder prediction 7 23 - -
Vifa4g04042 644 PANTHER NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY 29 644 - -
Vifa4g04042 644 Pfam Cell division control protein 24, OB domain 1 30 154 IPR035201 -
Vifa4g04042 644 Pfam Cell division control protein 24, OB domain 2 159 288 IPR035200 -
Vifa4g04042 644 Coils Coil 8 28 - -
Vifa4g04042 644 SUPERFAMILY Nucleic acid-binding proteins 493 613 IPR012340 -
Vifa4g04042 644 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04042 Vifa-Chr4 1291076034 1291088626 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04042 - - gmx:100793443 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04042 4 1291076034 1291088626 Vifa4g04042 4 1291076034 1291088626 ECH