Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04035 ATGCAGGAAATCGGCAAGACTGAATATGCATCCGCGACGGCACTGTTGAATCTCATTCCTTCAAAACATGGCTCGCACAGGATTACTTGTATAGCTTCTCTCAATGATGAGTTATCATGGTTTAAGAAAGAAGCCAAGAAATGGGATATTCAATTATCCGAGGTTGTTCCTCAAAAAGAAAACAAAGATTATTGTCGGTTGTTGGGAGGTTTGATGAGTTCAGATGTGGGGTATACTGTTGCTCTTACTGCATTTTGGGCGATTGAAGTTGTGTATCAAGAGAGTTTTGCGTCTTGTGTTGAAGAAGGTTCGAAAACTCCGAAGATGGTTGATCGGCGGTTGTTGAAGGCTTCTGATGAGGAAGTGAAGAAGGCTGAAGTTGTGTTTTTGAGTATTGTTGAGCATGAAGTTGAATTCTGGAACATGAGTAGTGGAAATTAA 441 0.4082 MQEIGKTEYASATALLNLIPSKHGSHRITCIASLNDELSWFKKEAKKWDIQLSEVVPQKENKDYCRLLGGLMSSDVGYTVALTAFWAIEVVYQESFASCVEEGSKTPKMVDRRLLKASDEEVKKAEVVFLSIVEHEVEFWNMSSGN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04035 146 Gene3D - 7 145 IPR016084 -
Vifa4g04035 146 Pfam TENA/THI-4/PQQC family 31 104 IPR004305 -
Vifa4g04035 146 PANTHER BIFUNCTIONAL TH2 PROTEIN 27 105 - -
Vifa4g04035 146 SUPERFAMILY Heme oxygenase-like 20 143 IPR016084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04035 Vifa-Chr4 1288975837 1288976666 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04035 K20896 - gmx:547557 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04035 4 1288975837 1288976666 Vifa4g04035 4 1288975837 1288976666 ECH