Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04019 ATGACGATCGACTTAGATTCGATCACTCGCAAAGTCGATGTCGATAATCGCATTCCTCTCCGCTATTACTATCGGATTGCCGATAACCTCCTCAAGCAGGCACGTGTTTACAGAGAGGAGAATAATGTAGTTGACTTGTACATCATACTCCTTAGATTTATAAGTTTGGTTTCCGAGACGATACCATATCATCGAGATTACCAAGCTTCACTTGCTAATGAAAGAGCAGCATTTAAGAGGAGATCACTACTTGTATTGGATGAGCTTGAGTCCTTGAAGCCTGAATTTAAACGCCGGTTGGACAAATTGAATAAACCACATGCACAGGCTACATTGCCCGAAACAAATGGGTACAATACGGCTTTGCAGAGTCCGGCATATTCAAGTTTGGAATGGTCAGCTATCAATAAAAGACATGACTCAATCATGGATTTCAAACAGTCTGCTGGAGTGGGCTCACAATCTTCATGGAAACCTAACAGTACGTTATCTTCAGTTTCCATGCCTATTGACAAGCAGTTCCAAAAATTATCTCTGAGTCTACCCCCACCAAATAAGGAGACCTTGTCAAGACACTCATTTTTAGGTCCAAGTGGTCTTCGGGCACAATGGCTCGGACCTAGTGCAGAAATAAAGGTTCAATATCCAAGCAGTAATGATCTTACTCATGCCAAAGATTCAAGCGCTGTAAAGTATGATCTTGATGGCATTAAAGATGATCAAGGACCACTTACATCCACAATGGATTCAATTCTCTCCTTGGATGATGGAAGGTGGTCTCATCCTACTGTTGAGTCCTGTTCTCCTGTTGTAACTGAAACCATGGGAGGACTCCTTACAGTTGCTCAACATCAAGCAACCTATGCCTCCTCCCGTTCTTGCTCAGGTTCACCCAGAACGTGCTTCTATTCCTCCTTCAAAGGTTGCAGATCCAAGGCCAGGACCGGCAAAATCTTCTCATGA 963 0.433 MTIDLDSITRKVDVDNRIPLRYYYRIADNLLKQARVYREENNVVDLYIILLRFISLVSETIPYHRDYQASLANERAAFKRRSLLVLDELESLKPEFKRRLDKLNKPHAQATLPETNGYNTALQSPAYSSLEWSAINKRHDSIMDFKQSAGVGSQSSWKPNSTLSSVSMPIDKQFQKLSLSLPPPNKETLSRHSFLGPSGLRAQWLGPSAEIKVQYPSSNDLTHAKDSSAVKYDLDGIKDDQGPLTSTMDSILSLDDGRWSHPTVESCSPVVTETMGGLLTVAQHQATYASSRSCSGSPRTCFYSSFKGCRSKARTGKIFS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04019 320 PANTHER AMSH-LIKE PROTEASE 3 273 - -
Vifa4g04019 320 FunFam AMSH-like ubiquitin thioesterase 3 1 117 - -
Vifa4g04019 320 SUPERFAMILY USP8 N-terminal domain-like 4 105 - -
Vifa4g04019 320 Gene3D - 2 121 - -
Vifa4g04019 320 Pfam USP8 dimerisation domain 4 99 IPR015063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04019 Vifa-Chr4 1284915827 1284920270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04019 K11866 - gmx:100812784 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04019 4 1284915827 1284920270 Vifa4g04019 4 1284915827 1284920270 ECH