Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03514 ATGGCTGATCTCAACCAAACCCCACCCCAACCATACAGACCCACCGCCACCTCATCACCACCCGTCTTTCTAAGAAAGCTTCAAAACAACCTTCACACACCAAACTCAACACATCTCGCTGCCATCTTAACCCTCCTCGTTACCGGATCCACTTTCCTCCTTCTCACAACCTTAACCGTAGCTGGTACCGTTCTCTCTCTCATCTTCTTCTCACCCTTGATCATCCTTTCCAGCCCGATATGGGTCCCGGCCGGTACTTTTTTCTTCCTCCTAACCGCTGGACTCTTGTCAATCTGTGGCTTTGGCCTCATCGCTGTGGTTGCTTCCTCTTGGTTGTACCGTTACTTTAGAGGTCTTCACCCGCCCGGTTCGGACCGGGTTGATTACGCTAGACACCGGATTTATGATACGGCTGCACATGTTAAAGATTATGCAAAAGAATATGGCGGGTATTTGCAGAGTAAGGTCAAGGATGCAGCGCCTGGTGCTTGA 492 0.5041 MADLNQTPPQPYRPTATSSPPVFLRKLQNNLHTPNSTHLAAILTLLVTGSTFLLLTTLTVAGTVLSLIFFSPLIILSSPIWVPAGTFFFLLTAGLLSICGFGLIAVVASSWLYRYFRGLHPPGSDRVDYARHRIYDTAAHVKDYAKEYGGYLQSKVKDAAPGA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03514 163 PANTHER OLEOSIN 30 158 IPR000136 GO:0012511|GO:0016020
Vifa4g03514 163 Pfam Oleosin 39 149 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03514 Vifa-Chr4 1099747581 1099748072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03514 1 163 Lipid Metabolism Gene Families AT3G18570 45.349 3.15e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03514 - - tpra:123921957 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03514 4 1099747581 1099748072 Vifa4g03514 4 1099747581 1099748072 ECH