Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03491 ATGTTCCGTTTCCGCATAAGCAACACCGTAGTCGGTGCACTCAACATCCTCTCTTTACTCCTCGGCCTCGCCGCCATTGCTTCCTCCGCCTACATCCACATCCGCGGCGGTTCCGACTGTCAAAAGGTCCTTGAGTACCCACTCCTAATCGGCGGCATATTCGTCGTCATCGTGTCGGGACTTGGAATCGCGGGATCGCTGTTTGGAATCAACAAAGCACTCTACAGTTACCTTCTGGTGACATTCTTGGTTGTGGTGGGACTTGCTTTCTTCACGGTGTTTGCTCTGTTTGTGACCAATAGAGGAGTGGGAAAACAGATATCTGGTAAAGGATATGGTGAGTATAAAGTCGCTGATTTCTCTCACTGGTTGCAACATTATGTTGTGAATGAAGAGAATTGGGATGAGTTCAAGAGTTGTTTGATGGATGCTCATGTTTGTCAGAATCTCGCCGTTAATGGTGGTCGGAATAACGACTCTCTCATCTTCAAACACTTGTCCACCACCCAGGCCGGGTGCTGTAAGCCGCCCGAGTATTGTGGATTTACGATGAAGAATGCTACGTTTTGGGAAGTGCCCAAGTCGGGTTTGGCTGCGAATAACTCTGATTGTGCGACATGGAATAATAGACAAGACAAACTGTGTTACGAGTGCAATGCATGCAAAGGAGGAGTGTTGGCTAATATAAGGAACCAATGGAGACATTTAACTGTGTTTAATGCTATTGTGCTTGTACTTGTTACTGTCATTTACGCTATGGGATGCCATGCCATCAGGAACAACCGAACGGATTCGCTCATTCAACATCCTTAA 813 0.4686 MFRFRISNTVVGALNILSLLLGLAAIASSAYIHIRGGSDCQKVLEYPLLIGGIFVVIVSGLGIAGSLFGINKALYSYLLVTFLVVVGLAFFTVFALFVTNRGVGKQISGKGYGEYKVADFSHWLQHYVVNEENWDEFKSCLMDAHVCQNLAVNGGRNNDSLIFKHLSTTQAGCCKPPEYCGFTMKNATFWEVPKSGLAANNSDCATWNNRQDKLCYECNACKGGVLANIRNQWRHLTVFNAIVLVLVTVIYAMGCHAIRNNRTDSLIQHP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03491 270 Pfam Tetraspanin family 8 253 IPR018499 GO:0016020
Vifa4g03491 270 PANTHER TETRASPANIN-8-RELATED 5 263 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03491 Vifa-Chr4 1094095968 1094096856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03491 4 263 Miscellaneous Gene Families AT1G18520 46.617 2.14e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03491 - - gmx:100815322 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03491 4 1094095968 1094096856 Vifa4g03491 4 1094095968 1094096856 ECH