LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa4g03459	ATGCCGCATCCGGCGGATTTGCAAAACAATACCGAATTCGATGAGTCAGATTCAGTCTCCAGCGCTGTTGCTTCAGCATGTAATCCCAATTTGAACCGTGACCTCTTCAAAGACCTCGTCGACATGGTCCCTCTCGTTCAATCCCTCCTCATAGATCGTAAACCGAGTCGTTCCTTTCCTCATCGTAGTTCCATGATCTATACCAAGGCACCGCCGAAAGATAAAAAGCAATCTATCTCTGCCACAAAGACGAGGGACCATGGAGCAAAAGAACAAGGACAAAACTCTGATGCTGATAACTTTTCTATGTTTTCTGGAAGGGCTTTTACATCAGAGAAGGACCTAGAAGAATTGGCTACCTTGAAGGAACAGATAGGAGACCTTAAGTTGAAGTTAAAGGAGAAAGAGGAACTTTTAAAGTCAGCAGATGCAAAACTCGATGAAATCAAACACCAGGTTTTAGAAAAGGATGGTTCCCTTAAATATACTCAACAACAACTCTCTGATGCTAAGATTAAACTTGCAGATAAGCAAGCTGCCCTTGAAAAGATAAATTGGGAAATGATGACATCCAACAAGAAAGTGGAGAAACTTCAAGAAGATCTGGACTCTGTGCAAGTGGATGTTTCGACATTCACGTTGCTGCTTCAAAGCTTAGCAGATACTGACACTGCAATTTACACAGATGATTATGACACCAAGCCTTATGTTTTCAATCACGTGCCTGAAATTGACGATATGGATGAGATGGAATGGCAGAAAATGGAAGAAGCAAGAAAAGCTTACATCGCTGCAGTTGCTATTAGCAAAGAAAAGCAAGATGAAGAATCTATTGCTGCCGCTGCTAATGCTAGGTTACGTCTTCAATCACTAGTTTTCAAATCCAAAAATTTCAACATATGA	903	0.412	MPHPADLQNNTEFDESDSVSSAVASACNPNLNRDLFKDLVDMVPLVQSLLIDRKPSRSFPHRSSMIYTKAPPKDKKQSISATKTRDHGAKEQGQNSDADNFSMFSGRAFTSEKDLEELATLKEQIGDLKLKLKEKEELLKSADAKLDEIKHQVLEKDGSLKYTQQQLSDAKIKLADKQAALEKINWEMMTSNKKVEKLQEDLDSVQVDVSTFTLLLQSLADTDTAIYTDDYDTKPYVFNHVPEIDDMDEMEWQKMEEARKAYIAAVAISKEKQDEESIAAAANARLRLQSLVFKSKNFNI	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa4g03459	300	Coils	Coil	118	152	-	-
	Vifa4g03459	300	Coils	Coil	181	208	-	-
	Vifa4g03459	300	SUPERFAMILY	Tropomyosin	117	212	-	-
	Vifa4g03459	300	MobiDBLite	consensus disorder prediction	57	102	-	-
	Vifa4g03459	300	MobiDBLite	consensus disorder prediction	76	93	-	-
	Vifa4g03459	300	PANTHER	PROTEIN MICROTUBULE BINDING PROTEIN 2C	18	294	IPR040289	GO:0008017\|GO:0010497

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa4g03459	Vifa-Chr4	1083592425	1083593813	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa4g03459	-		-	psat:127073701	472.626

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa4g03459	4	1083592425	1083593813	Vifa4g03459	4	1083592425	1083593813	ECH