Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03449 ATGCAGAGCTTAGTTCGCAGGCTGACGGTGGTGGCACGCCAACCCAACCTCTCCTTCAATTCTCACCGTATCTCTCACACTCATCCTCAACCTTCCAATCTAGGGCATCCCATTCCCTCTTCCTCCGGCATTCATCATTTTCACTCATGGCGCTCCTCTCTCTCCCAACCAATGGCCGTCCAACAGCTCTCGTTCCTCTCGCGCAACTATCTCTCCGCTTTATTCTCCAAAAGCCTCCTTCTTCGTACTCTTCCCAGAGTTCATTTTCATCGGCAGAACTTCACTTTCAACCAAAACTATAACTCTTACCGCCGTACTTGGAGATCGTGGTTTAACAGGCTAACACCAAATGATGTGGTTCTGGGCTTGATTGTATCTAATGTTGCTGTTTATTTATTTTGGAGGATAGCAAGTGAAAAGTTTATGCTAAATAACTTTACTATCTCCTTGGACAATATTAAGAGTGGACGCTTCCACACTTTGATCACCAATGCATTCAGTCACGCAGATACCTGGCATTTAATATACAACATGATTGGACTCTACTTCTTTGGAGCGAATATTGCAAGTCAATTTGGACCTGAATTTCTGCTGAAGCTATATCTTGCTGGCGCAATAGGTGGTTCTATTTTCTATCTGGTGCATCAAGCTTACAAGGCTCAAACTTCAAAGCAGGACTGGAGAGCTATCAACTCTTCAAGGGAATTTGCGTTGGGAGCAAGTGGAGCTGTGAATGCAGTTATACTGCTGGACATATTCCTCAATCCAAGAGCAACTTTATACTTGAACTTTTTTATACCAGTTCCTGCGGCGTTGCTGGGTATCTTTTTGATCGGGAAAGATTTGCTGAATATAATTGAGGGAGACAATACAATATCAGGATCCGCACATTTGGGGGGTATTGCAGTTGCAGCCATAGCATGGGCACGAATTCGGAAAGGAAGATTCTAA 951 0.4406 MQSLVRRLTVVARQPNLSFNSHRISHTHPQPSNLGHPIPSSSGIHHFHSWRSSLSQPMAVQQLSFLSRNYLSALFSKSLLLRTLPRVHFHRQNFTFNQNYNSYRRTWRSWFNRLTPNDVVLGLIVSNVAVYLFWRIASEKFMLNNFTISLDNIKSGRFHTLITNAFSHADTWHLIYNMIGLYFFGANIASQFGPEFLLKLYLAGAIGGSIFYLVHQAYKAQTSKQDWRAINSSREFALGASGAVNAVILLDIFLNPRATLYLNFFIPVPAALLGIFLIGKDLLNIIEGDNTISGSAHLGGIAVAAIAWARIRKGRF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03449 316 Gene3D - 114 315 IPR035952 -
Vifa4g03449 316 SUPERFAMILY Rhomboid-like 115 312 IPR035952 -
Vifa4g03449 316 FunFam RHOMBOID-like protein 12, mitochondrial 113 315 - -
Vifa4g03449 316 PANTHER RHOMBOID PROTEASE 22 309 - -
Vifa4g03449 316 Pfam Rhomboid family 153 311 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03449 Vifa-Chr4 1078697531 1078701805 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03449 - - gmx:100819148 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03449 4 1078697531 1078701805 Vifa4g03449 4 1078697531 1078701805 ECH