Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03441 ATGGCATTATTGCCTTCACCACCTGGTTTTGCCCCTTTTGTGTTTCTATTGCTCGTCATTGGGAGCACGGCAAGGCCATTGTATCCACTTCCTGGCAAAGCTCGCGATGGAAGTAGACAGCCTCTTCAAACTTTTCGCCCGTATAACATTGCACATAGGGGCTCAAACGGAGAACTTCCCGAAGAAACTCATCAGGCCTACATGAGAGCTATTGAGGAAGGTGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTGTATGCTTCCATGATGTTATCCTTGACGATACTACTGACGTAGCAAATTACAAAGAGTTTGCTCATCGTAAAACAACATATGAAGTTCAAGGGGTCAATACCACTGGATATTTTATTGTGGATTTCACATTAAAGGAATTAAAGTCATTGAGGGTGAATCAGAGATTTAGCTTTAGGGATCAACAATTTAACGGAAAATTTCAAATAATCACTTTCGAAGAGTTCATTACCATAGCATTGGATGCACCCAGGGTTGTTGGAATATATCCTGAAATAAAAAATCCAGTACTCATCAATCAGCATGTGAAATGGTCGGATGGAAAAAAGTTTGAGGACAAATTTGTGGAAACACTTCACAAATTTGGATACAAGGGTTCATACCTGTCAAAAAATTGGTTGAAACAACCTGTGTTTATTCAGTCCTTTGCTCCAACTTCACTTGTGTATATATCAAATCAAACGGACTTGCCCAAGGTGTTTTTAATCGATGATGTTGATATTCCAACACAAGACACTAATCAATCATATTGGGAAATTACATCTGATTCATACCTAGACTACATAAAGCAATATGTTGTGGGAATCGGACCTTGGAAGGATACGTTGGTTACTGTGATAAATAATTATGCGATGACTCCATCGGATCTTGTTTCCAGGGCACATGCTCGTAATCTGCAGGTGCATCCATACACTTATAGAAATGAGAACAAGTATTTGCATTTCAACTTTAGTCAAGATCCATACAAGGAATACGATTACTGGATCAACAATATAGGAGTTGATGGTCTGTTTACAGATTTCACCGGTAGTCTTCATAATTTTCAGGAATGGACCTCTCCTAAACATCATGTTGGCGATACTGCATCCAAGTTATTACATGAAATTGCTTTGTTGGCATCCCCCTATGAATGA 1182 0.3892 MALLPSPPGFAPFVFLLLVIGSTARPLYPLPGKARDGSRQPLQTFRPYNIAHRGSNGELPEETHQAYMRAIEEGADFIETDILSSKDGVLVCFHDVILDDTTDVANYKEFAHRKTTYEVQGVNTTGYFIVDFTLKELKSLRVNQRFSFRDQQFNGKFQIITFEEFITIALDAPRVVGIYPEIKNPVLINQHVKWSDGKKFEDKFVETLHKFGYKGSYLSKNWLKQPVFIQSFAPTSLVYISNQTDLPKVFLIDDVDIPTQDTNQSYWEITSDSYLDYIKQYVVGIGPWKDTLVTVINNYAMTPSDLVSRAHARNLQVHPYTYRNENKYLHFNFSQDPYKEYDYWINNIGVDGLFTDFTGSLHNFQEWTSPKHHVGDTASKLLHEIALLASPYE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03441 393 ProSiteProfiles GP-PDE domain profile. 47 365 IPR030395 GO:0006629|GO:0008081
Vifa4g03441 393 Pfam Glycerophosphoryl diester phosphodiesterase family 52 359 IPR030395 GO:0006629|GO:0008081
Vifa4g03441 393 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 364 IPR017946 GO:0006629|GO:0008081
Vifa4g03441 393 FunFam Glycerophosphodiester phosphodiesterase GDPD5 45 364 - -
Vifa4g03441 393 CDD GDPD_ScGlpQ1_like 47 358 - -
Vifa4g03441 393 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 43 372 - -
Vifa4g03441 393 SUPERFAMILY PLC-like phosphodiesterases 47 363 IPR017946 GO:0006629|GO:0008081
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03441 12 392 Acyl Lipid Metabolism Gene Families AT1G74210 73.298 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03441 K01126 - gmx:100778145 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03441 4 1076015176 1076018847 Vifa4g03441 4 1076015176 1076018847 ECH