Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03426 ATGGCTGCTGCTTTTGCTCTTGCCCTACTTCTCTTCTCCTTCACCGCCATTCCTTCAAGTGCTAATTGGTGCGTTTGCAAAGATGGAAGTGATGCAGTTTTGCAGAAAACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTCCATCAAAACGCTCCTTGTTTCCAACCAAACACAGTCAGAGCTCACTGCAGCTACGCTGTGAACAGCTACTTCCAGAAGAAAGGTCAAGCACCAGGAACTTGTGACTTTGCAGGAACAGCCACTCCTGTTGCATCTGACCCAAGTGTTAGTGGCTGTGTCTTCCCTTCAAGTGCCAGTGGTGCAGGCACTAGCACAACAACCCCATCATCAGGCACCACTACACCCTCCATGGGAACCGGCACCACCCCATCCACAAGTACCGGCACCGGCACCAGCAGTGGTATGGGCACTGGCACTGGCAGCGGCACCGGCACCGGCACTACTCCATACAACACATCTCCAGGAGTGTTAGGAGGTATTGGAACTGGTATGGGGCCTTCTGGATCTGGAGGAATGAATGATGATAGTCATGGTGGGATTAGACTTTTGGACACTAGTTTCTTATCAATTCCACTTTTCTCTATTTTCATTATGTTTTGGTAG 636 0.5031 MAAAFALALLLFSFTAIPSSANWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSYFQKKGQAPGTCDFAGTATPVASDPSVSGCVFPSSASGAGTSTTTPSSGTTTPSMGTGTTPSTSTGTGTSSGMGTGTGSGTGTGTTPYNTSPGVLGGIGTGMGPSGSGGMNDDSHGGIRLLDTSFLSIPLFSIFIMFW 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03426 211 SMART X8_cls 22 105 IPR012946 -
Vifa4g03426 211 MobiDBLite consensus disorder prediction 109 183 - -
Vifa4g03426 211 PANTHER BETA-1,3 GLUCANASE 8 124 IPR044788 -
Vifa4g03426 211 MobiDBLite consensus disorder prediction 109 166 - -
Vifa4g03426 211 Gene3D - 17 114 - -
Vifa4g03426 211 FunFam Glucan endo-1,3-beta-glucosidase 4 18 109 - -
Vifa4g03426 211 Pfam X8 domain 23 92 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03426 Vifa-Chr4 1069813173 1069814840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03426 19 118 Miscellaneous Gene Families AT2G16230 43.564 2.18e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03426 - - gmx:100500078 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03426 4 1069813173 1069814840 Vifa4g03426 4 1069813173 1069814840 ECH