Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03401 ATGACTACCTCGCCGCACCGTTCCGGCGGCGAAAGCGACGGCAACGGCGACAAAAGACCAAGACACTTCGACACAAAGACAAAGACCATCTGCTGGACAAAGGCAGATATTGTACCCGGCCGCCACCCAGAAAGGTGGCGTAAAGACGCCGCCGGTAACGTTGTCTGCAAGCGCTTCTTCAACTGCCTTGGTTGCCTCTGCTACGAGTACGATCATATCATCCCTTTTTCCAAAGGTGGTGAATCGACCGCTGAAAATTGCCAAATACTTCAATCAAGAGTTAATAGATTAAAATCGGACAAATATCAGATCGATTCGGATAAGTTGAAAGGCTACTCTTGTGATATTAATTTTACTGACAGGGAGCTCGATATAATTGAGATGGCTGTTTATGGTGATGTAATCCGGCCAGGGAACCAGTGTAGATGCAGAACTGTTGATGAAATGCTTGGAAAATTTAAGGCAAAAGCAAAAGACAACACAGATGCTTGCAAGTTGCCATAG 504 0.4603 MTTSPHRSGGESDGNGDKRPRHFDTKTKTICWTKADIVPGRHPERWRKDAAGNVVCKRFFNCLGCLCYEYDHIIPFSKGGESTAENCQILQSRVNRLKSDKYQIDSDKLKGYSCDINFTDRELDIIEMAVYGDVIRPGNQCRCRTVDEMLGKFKAKAKDNTDACKLP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03401 167 CDD HNHc 57 99 IPR003615 -
Vifa4g03401 167 Gene3D - 33 115 - -
Vifa4g03401 167 MobiDBLite consensus disorder prediction 1 23 - -
Vifa4g03401 167 SMART HNH_5 50 96 IPR003615 -
Vifa4g03401 167 PANTHER HNH ENDONUCLEASE 15 145 - -
Vifa4g03401 167 Pfam HNH endonuclease 67 100 IPR002711 GO:0003676|GO:0004519|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03401 Vifa-Chr4 1060847776 1060849721 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03401 - - psat:127073757 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03401 4 1060847776 1060849721 Vifa4g03401 4 1060847776 1060849721 ECH