Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03342 ATGGCTTTCACCACTAACAAGGAGTCCACATTGAGCTCCACTCTATTAAACCCTAATGACTTTGTAGATTTGGTAGGTACCCTTGTCTCAATTCTGACTCCACAAATTTTCGTTCGGTTACCGAACCCACTAGACCCAAACTTCACTGCATCACAATTCACAACCATAGTGTTCCACCATTCCATCCCGATATCTCAAATCAAAATTCACATTTTCCTAATCAACGTCGGTGTTCGATCGAAGATGGGAGGGTCTGGATCCGGATCTGGTGCCGCTGATTTTCTTATGCTGCTTATCAGAAACATTGATGTTCTTGCTGGGCCTGTGGTTAGTCTTGTTTATCCTCTATATGCTTCGGTTAGGGCAATTGAGAGTAAGTCTCCCGTGGATGATCAGCAATGGCTAACTTATTGGGTTCTCTATTCCATGATCACTCTTTTTGAACTTACTTTTGCCAAAATTCTTGAATGGATTCCTATATGGCCATATGCAAAGCTGATTCTAACCTGCTGGAAAAAGGACGTCTTCTCTAAGCCAGATGACATTATAACTGCTGCAGAGAAGTACATCAAAGAGAATGGAACAGAGGCATTTGAGAATCTGATCCATAGGGCTGATAAATCACAATGGGGAGGTAGTCACCATACAAAATCACAGTGGGATGATAGTCACCATACAATGTATGACGAGCATTATTGA 699 0.4192 MAFTTNKESTLSSTLLNPNDFVDLVGTLVSILTPQIFVRLPNPLDPNFTASQFTTIVFHHSIPISQIKIHIFLINVGVRSKMGGSGSGSGAADFLMLLIRNIDVLAGPVVSLVYPLYASVRAIESKSPVDDQQWLTYWVLYSMITLFELTFAKILEWIPIWPYAKLILTCWKKDVFSKPDDIITAAEKYIKENGTEAFENLIHRADKSQWGGSHHTKSQWDDSHHTMYDEHY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03342 232 PANTHER HVA22-LIKE PROTEINS 96 171 IPR004345 -
Vifa4g03342 232 Pfam TB2/DP1, HVA22 family 115 171 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03342 Vifa-Chr4 1045000830 1045004240 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03342 K17279 - gmx:100306331 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03342 4 1045000830 1045004240 Vifa4g03342 4 1045000830 1045004240 ECH