Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03334 ATGTCTAAAGCATCCTTATTGTGTTGTGCCATCTTGGGGCTTCTTGTTCTTGTTCATGCAAAGGAAAATAAAAATATTGGATTTTATGAATTGAAAAGAGGAGATTTGAGGCTTAATTTGACTAACTATGGTGCTACAATTGTTTCTCTTTTTGCACCTGATAAACATGGGAATTTAGCTGATATTGTTCTTGGTTATGATTCCATTGAGTCCTATGAGACTGATACATGTTACTTCGGTGCTCTTATTGGGCGTGTAGCAAATAGGATTGGAGGAGCTCAATTCACTCTGGATGGCAAAACATACAAATTGCCGGCGAATGATCATGGGAACACACTCCACGGTGGTACCAAAGGGTTCGGCGACAATATATGGACAGTAGGTTATCACAAGGAAGACAGTCATATCACATTTGTCTACAACAGTTCCGATGGCGAGCAAGGTTTTCCTGGAAAACTCGAGGTAAGTGTGACTTACATGTTAATTGAAAAACACATATTGGGTGTGAAAATGACTGCTAGGCCAATCGACAAACCGACACCAGTAAATCTAGCACAACATACTTACTGGAACCTAAGAGGACATGACAGTGGCGACATTCTATCACACACCGTTCAAATATTTGGTTCAAACATCACACCAGTAGACGATAAACTCATCCCGACAGGCAAACTCCAGCCCGTGAGCAACACGCCATACGATTTCCTTACGCCAAAAGAAGTTGGAAGCCGAATTAACGAGCTTCCTGGTTTATACGACATTAACTACGCGTTGGACAAGAATGGTAAAAGTTACTTGAGCAAAGATGCTGTGGTGAGAGATCCTGTCTCAGGGAGGAAAATGGAGTTGTGGTCAAATCAAGTTGGGTTGCAGTACTATACCAGTGGCATGTTGGGTGATACTAAAGGAAAGAATGGAGCTACATATCATAAATATGGTGGCATTGCTTTGGAGACACAGGGTTATCCAGATTCAGTGAATTTGCCTAACTTTCCATCTCAGATTGTGAAGCCTGGAGAGACTTACAAGCATATCATGGTTTATAGATTCACAGCTAGCTAG 1062 0.4153 MSKASLLCCAILGLLVLVHAKENKNIGFYELKRGDLRLNLTNYGATIVSLFAPDKHGNLADIVLGYDSIESYETDTCYFGALIGRVANRIGGAQFTLDGKTYKLPANDHGNTLHGGTKGFGDNIWTVGYHKEDSHITFVYNSSDGEQGFPGKLEVSVTYMLIEKHILGVKMTARPIDKPTPVNLAQHTYWNLRGHDSGDILSHTVQIFGSNITPVDDKLIPTGKLQPVSNTPYDFLTPKEVGSRINELPGLYDINYALDKNGKSYLSKDAVVRDPVSGRKMELWSNQVGLQYYTSGMLGDTKGKNGATYHKYGGIALETQGYPDSVNLPNFPSQIVKPGETYKHIMVYRFTAS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03334 353 Pfam Aldose 1-epimerase 29 349 IPR008183 GO:0005975|GO:0016853
Vifa4g03334 353 SUPERFAMILY Galactose mutarotase-like 17 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa4g03334 353 PIRSF GALM 16 353 IPR015443 GO:0016853|GO:0019318
Vifa4g03334 353 CDD galactose_mutarotase_like 29 350 IPR047215 GO:0016853
Vifa4g03334 353 PANTHER ALDOSE-1-EPIMERASE 25 351 - -
Vifa4g03334 353 Gene3D - 16 352 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03334 Vifa-Chr4 1043589446 1043591057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03334 8 352 Miscellaneous Gene Families AT3G47800 57.971 1.57e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03334 K01785 - gmx:100806956 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03334 4 1043589446 1043591057 Vifa4g03334 4 1043589446 1043591057 ECH