Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03288 ATGAAGACGACGAAGGGTGGTAAAGTTATGAACCCTACCGATGCTTATCGGAAGGAGATTCGCAAGAAGGAATTGAAAAGGAATAAGAAAGAAAGAAAGAAGGTGAGGGAGGTTGGGATCTTGAAGAAGGATCCTGATCAGCTGAAAAAGCAGATTGATAACTTGGAAATGATGAAGGCTGATGGTGCCTTGGATAAAGCAAGAAAGCACAAGAAGAGGCAACTTCAAGATACACTTAATCTTGTCATGAAGAAGAGGAAGGAATATGAAGAAAAAATGCGAGACAAGGGTGAGGCTCCTGTTATGTTCAGTCATTTGGGCCCTCCTCGAAGGAGAACAAGCGCTGAAGAGGAAGAGAGAGTTAATCACCCAAAACCAGAGGACTCTGTTTATTACCATCCTACCTTAAATCCTACCGGGGCTCCACCGCCAGGAAAACCCCCTATGTTCAAATCGTCTATAGGACCTAGAATTCCCTTGTTTGATGGTTCATCAAGTACTGCTGCATCTTCCTCGGCAATAGAGTCCGAGGATGGTGTATTATCCGTACCTCCACCTCCCCCACCACCACCACTGCCTGATGCTAGTTCAGCTGATGGTACTGTTTTACCTGCATCTTTGCCTCTGCCTCCACCACCTCCCATGCCTCCAAAGCCTGCTGCTGGGTTGCCTGCATCATTACCTCTGCCTCCTTTGCCACCTCCACCTCCCGGTCCCCCGCCTAAAGAACAAACTGTAAATCGGTCTTTACCGCCTCCTCCACCTCTACAACAGTCTCAGCCGCCTCCACCTGGCACCAATGAAGGTGAAGAAAGGAATCAGTCTGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCAGCTTCCTCCGCCTCCTCCCCCTCCAAATCGTATGCCCCCAAATTCTAGTGCCATACAGTCAGATGGTGCTGTGGTTTCTACCGACAACAAGAATTCTCTGTCAAACCAGGAGATCCAGAAAATGGTTCCTGGGCCTCCACCTCCTCCTCCTCCAAGGCAACAACCTCCTGTTCCAGGACCCACATTAATCCCAACTTTACAGCCTGATGTATTGCCTCCTGGAATATCTCGGTTCCCACCACCCCCACCCCCACCTGATATGAGGCCTCCTCTACCTATGGTTGGACTTCCAGGTCAGGCTCCTTCTCCTGGAATGATGGTCCCCCTAATCCCAAGGCCACCATATGGTCTTCCACCTGGACCTCCTCCAATGATGAGACCACCACTTCCACCTGGCCCTCCTCCAAACTTTCAGGAAGAGGATCATATGGCAATTAGGCCACCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTGAAACGACCATTAGCTCAGCACACTCCAGAACTCACATCAATGGTTCCTGCGTCCGTGCGGGTGAGAAGAGAGACTGCAATGACCAAAACAAAGCCAAAACCGTCTGTGTCAACGTCAACATCTAGAACAGTCTCTGCACCACCAGCGCCAACTATTGTAAAACCAGACTCAGTGAGCTCGTCATCTGCTCCAAAAGCACCGAGCATTGATGACTCATACTCGGCTTTCTTAGAGGACATGAAAGCACTTGGTGCCCTTGATGGTTGA 1626 0.4951 MKTTKGGKVMNPTDAYRKEIRKKELKRNKKERKKVREVGILKKDPDQLKKQIDNLEMMKADGALDKARKHKKRQLQDTLNLVMKKRKEYEEKMRDKGEAPVMFSHLGPPRRRTSAEEEERVNHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLFDGSSSTAASSSAIESEDGVLSVPPPPPPPPLPDASSADGTVLPASLPLPPPPPMPPKPAAGLPASLPLPPLPPPPPGPPPKEQTVNRSLPPPPPLQQSQPPPPGTNEGEERNQSALPDNLSSKEPGQVQLPPPPPPPNRMPPNSSAIQSDGAVVSTDNKNSLSNQEIQKMVPGPPPPPPPRQQPPVPGPTLIPTLQPDVLPPGISRFPPPPPPPDMRPPLPMVGLPGQAPSPGMMVPLIPRPPYGLPPGPPPMMRPPLPPGPPPNFQEEDHMAIRPPPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTKTKPKPSVSTSTSRTVSAPPAPTIVKPDSVSSSSAPKAPSIDDSYSAFLEDMKALGALDG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03288 541 MobiDBLite consensus disorder prediction 263 287 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 288 303 - -
Vifa4g03288 541 Pfam mRNA biogenesis factor 126 186 - -
Vifa4g03288 541 Pfam WW domain binding protein 11 7 84 IPR019007 GO:0006396
Vifa4g03288 541 Coils Coil 13 33 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 110 127 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 394 427 - -
Vifa4g03288 541 Coils Coil 72 92 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 507 521 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 181 195 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 90 525 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 483 500 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 159 177 - -
Vifa4g03288 541 PANTHER WW DOMAIN-BINDING PROTEIN 11 318 533 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 304 329 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 205 262 - -
Vifa4g03288 541 MobiDBLite consensus disorder prediction 331 387 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03288 - - gmx:100792892 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03288 4 1030435146 1030442454 Vifa4g03288 4 1030435146 1030442454 ECH