Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03258 ATGGCACTACTTTTCAACTTACAGTTTTCTCGTTGGACTTTCTACAAACACCTTACGCCGCGTAAATATACAACGCTCTGTCAGCACAATTCCACCGCCAATTTATCCCATTTCGTAACCCTAACTTCCCGCCAGAAAGACCAGATTCATCTCTACGTCGATACACTTCTTCAATGGAACAAGCGCATGAATCTAACCGCAGTAAAAGAAGTGAATGAAGTCATGGAAAGACACATTGAGGATTCCCTCGCGATTTTGCCTCCGTTATGTGATAATTATATCAGCCACTGCAGCAATTCCATCGATAAGCTTAAACTCGTCGATGTTGGAACTGGTGCAGGTCTTCCTGGAGTAGTTTTGGCTATAGCTCGACCAGATTGGGATGTAACGCTGATGGAGTCTATGAACAAGCGGTGCGTCTTCTTGGAGCACGTTGTTGGTGTTATTGGTTCCACCAATGTTCAAATTGTAAGAGGAAGAGCAGAGAGTTTGGGGCAGGATCTCTGCTTCAGAGAGAAATTTGACATAGCAGTAGCCAGGGCAGTTGCAGAGACGAGAATATTAGCTGAGTATTGTCTTCCATTGGTTCGTGTTGGAGGAATGTTTATTGCTGCCAAGGGTCATGATCCTGAGGATGAAGTTAAGAAAGCTGAAAGCGCCATCAAGAAAATGGGTGCATCATTATTGCAAGTATGCTCAGTGGAGTCACAAAGCCCATATGGTCAGCAACCATTGTAA 738 0.4431 MALLFNLQFSRWTFYKHLTPRKYTTLCQHNSTANLSHFVTLTSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLCDNYISHCSNSIDKLKLVDVGTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSTNVQIVRGRAESLGQDLCFREKFDIAVARAVAETRILAEYCLPLVRVGGMFIAAKGHDPEDEVKKAESAIKKMGASLLQVCSVESQSPYGQQPL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03258 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 233 IPR029063 -
Vifa4g03258 245 FunFam Ribosomal RNA small subunit methyltransferase G 25 245 - -
Vifa4g03258 245 PIRSF GidB 26 245 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vifa4g03258 245 Pfam rRNA small subunit methyltransferase G 46 235 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vifa4g03258 245 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 38 230 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vifa4g03258 245 NCBIfam 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 51 236 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vifa4g03258 245 Gene3D Vaccinia Virus protein VP39 21 245 IPR029063 -
Vifa4g03258 245 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 3 243 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03258 K03501 - gmx:100818428 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03258 4 1021370713 1021373182 Vifa4g03258 4 1021370713 1021373182 ECH