Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03257 ATGGAAAATAAGCGGAAAAGGAAGCAAGCGGCGGAGACCGCCGTCAAGCGAAAGCCGAAATCTATTCGGGTGGGTCAAATCCAAACAGAGAATCCGAAAAACCCATTCCCTTCCCACACTGCACCAACCCCACAAGAATGCCTCGACATACGCGACACCCTCTTAACCCTACACGGCATACCTCCAGAACTCGCCAAATACCGCAAATCGCAATCAACTGACGACACATCACCACCGGAAACCGTTCTCGACGGTTTAGTCCGGACAATACTCTCACAGAACACCACCGAAACTAATTCCCAGAAAGCTTTTGGTTCTCTGAAATCATTGTTTCCCACATGGGAACATGTGCACGGTGCTGAGTCTAAGGAGTTGGAGAATGCTATTCGATGTGGTGGCTTAGCACCGACTAAGGCTTCGTGTATTAAGAATTTGTTGCGGTGTTTGTTGGAGAGAAAGGGGAAATTGTGCTTAGAGTATTTGAGACATTTGTCTGTTGATCAAGTTAAAGCTGAGCTTTCTCTTTTCAAAGGAATTGGTCCCAAAACAGTGTCTTGTGTGTTGATGTTCAACCTTCAGCTAGATGATTTTCCCGTGGACACTCACATATTTGAGATTGCAAAAACCATGGGTTGGGTACCTTCTGTTGCAGACAGAAACAAGACATACCTTCATCTAAACCAAAAGATCCCGGATGAACTTAAGTTTGACCTGAATTGCCTTTTGTATACTCACGGGAAGCTCTGCAGTAAATGCTCCAGTAAAAAAGGAAACAAGCAACAGGAGAAATTCAATGATAACTTGTGTCCTTTATTAAATTATTATAAAGAGCCAGTTTGA 840 0.4393 MENKRKRKQAAETAVKRKPKSIRVGQIQTENPKNPFPSHTAPTPQECLDIRDTLLTLHGIPPELAKYRKSQSTDDTSPPETVLDGLVRTILSQNTTETNSQKAFGSLKSLFPTWEHVHGAESKELENAIRCGGLAPTKASCIKNLLRCLLERKGKLCLEYLRHLSVDQVKAELSLFKGIGPKTVSCVLMFNLQLDDFPVDTHIFEIAKTMGWVPSVADRNKTYLHLNQKIPDELKFDLNCLLYTHGKLCSKCSSKKGNKQQEKFNDNLCPLLNYYKEPV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03257 279 CDD ENDO3c 86 246 IPR003265 GO:0006284
Vifa4g03257 279 Gene3D Hypothetical protein; domain 2 79 198 - -
Vifa4g03257 279 PANTHER - 5 276 - -
Vifa4g03257 279 SMART endo3end 91 248 IPR003265 GO:0006284
Vifa4g03257 279 Gene3D - 78 249 IPR023170 -
Vifa4g03257 279 MobiDBLite consensus disorder prediction 1 45 - -
Vifa4g03257 279 Pfam HhH-GPD superfamily base excision DNA repair protein 87 230 IPR003265 GO:0006284
Vifa4g03257 279 SUPERFAMILY DNA-glycosylase 78 276 IPR011257 GO:0003824|GO:0006281
Vifa4g03257 279 MobiDBLite consensus disorder prediction 1 19 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03257 K10773 - gmx:100802952 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03257 4 1021255918 1021258294 Vifa4g03257 4 1021255918 1021258294 ECH