Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03246 ATGCGATCCACTCGTTCCACCCCCACCTTCACCGTCTTCGCTCTCTTCCTCATCGCGATCCTTCCCCATGTTACTATTCAGGCACACTCATTCTCACCATTTGCATCGTCTCTCGAAACCCTCCAAAAACAACTAGGGTACACTTTCAAGACCATAAGTCTTCTCCGTCGTGCTATGACTCACGCTTCCTTCTCCGAAGAAAACAACAAAGCTTTCAGCATTTTTGGTGCTACCATCATAGAAACATCCGTTTCTTTCAATTTGCTTTCCAAAGACGTTGATGTTTCTGCCAAAGAGATGAATCGTCGATTATCGTTGATCTCCAATGTTGACTCTTCTTGTGCCGTTGATGGACTGCGTTTGGGTTTGCACAAGGTGGTTCGTGTTTCGCCCAAGACCAATTCTTCTTCCACTGCTGTGGTTTGTGGTGCTTTCCGATCAATATTCGCTGCTATTGCTCTTGATACTGGCGATTTGGATACTGCTGGTAATGTTTTCTTGACTGTTCATGGTCGTGATCTGGGGTTTTCTATGGATATGTGA 543 0.453 MRSTRSTPTFTVFALFLIAILPHVTIQAHSFSPFASSLETLQKQLGYTFKTISLLRRAMTHASFSEENNKAFSIFGATIIETSVSFNLLSKDVDVSAKEMNRRLSLISNVDSSCAVDGLRLGLHKVVRVSPKTNSSSTAVVCGAFRSIFAAIALDTGDLDTAGNVFLTVHGRDLGFSMDM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03246 180 Pfam Ribonuclease-III-like 53 158 IPR000999 GO:0004525|GO:0006396
Vifa4g03246 180 Gene3D Ribonuclease III domain 36 174 IPR036389 GO:0004525|GO:0006396
Vifa4g03246 180 ProSiteProfiles Ribonuclease III family domain profile. 38 157 IPR000999 GO:0004525|GO:0006396
Vifa4g03246 180 SMART riboneu5 53 179 IPR000999 GO:0004525|GO:0006396
Vifa4g03246 180 SUPERFAMILY RNase III domain-like 37 169 IPR036389 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03246 - - aprc:113847954 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03246 4 1019092810 1019093423 Vifa4g03246 4 1019092810 1019093423 ECH