Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03242 ATGGTTAACACTGATTCTATAAGAACTCTCATTGGAATAATCGGAAATGTCATCTCATTTTGTTTATTCATGTCTCCCTTGCCTACATTTATAAAAATATGGAAAGCAAAATCAGTGCAAGATTTTAAACCAGATCCATATGTGGTAACAATACTCAATTGTGCAATGTGGTCATTCTATGGAATGCCATTCATAAGTGAAAGCAACACTCTTGTCGTCACAATTAATGGCTTTGGTTTTTTCCTTGAGATTGTCTACACTTCTATTTTCTTCATATATTCTACCGCGAACAAGCGTAAGAAGATCTCGTTGGCCCTTCTTGCGGAAGTTGTCTTCCTTTTGTTAGTGATATTTATTGTCATGTATTTTATTGACAACCAAAAGCACAGAAATTTGATTGTTGGATTTATATGCATAATCTTCAACATCCTTATGTACTTTTCACCCTTAACTGTCATGAGACAAGTCATTAGAACAAAGAGTGTGAAGTATATGCCATTCTTACTTTCACTTGCCAACTTCCTCAATGGACTTGTTTGGACAACTTATGCACTTCTTAAATGGGATCCATTCATAGCGGTTCCCAATGGATTGGGAGCAATTTCTGGATTGGCTCAGCTCATCCTTTATGGAATTTACTATCGATCAACAAAGTGGGACGAAGAACTGCCGTCTAATATCAACATGGTATGA 693 0.3622 MVNTDSIRTLIGIIGNVISFCLFMSPLPTFIKIWKAKSVQDFKPDPYVVTILNCAMWSFYGMPFISESNTLVVTINGFGFFLEIVYTSIFFIYSTANKRKKISLALLAEVVFLLLVIFIVMYFIDNQKHRNLIVGFICIIFNILMYFSPLTVMRQVIRTKSVKYMPFLLSLANFLNGLVWTTYALLKWDPFIAVPNGLGAISGLAQLILYGIYYRSTKWDEELPSNINMV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03242 230 PANTHER RAG1-ACTIVATING PROTEIN 1 17 217 IPR047664 -
Vifa4g03242 230 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Vifa4g03242 230 FunFam Bidirectional sugar transporter SWEET 9 101 - -
Vifa4g03242 230 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Vifa4g03242 230 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016020
Vifa4g03242 230 Gene3D - 127 218 - -
Vifa4g03242 230 Gene3D - 7 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03242 Vifa-Chr4 1018130438 1018131858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03242 1 194 Miscellaneous Gene Families AT5G62850 57.732 7.99e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03242 K15382 - gmx:100810948 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03242 4 1018130438 1018131858 Vifa4g03242 4 1018130438 1018131858 ECH