Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03230 ATGGCAACAAAATCACCACCTCCTCCTCCCGTCGCCACCGCCACCGCCACCGTTGCCGATGTAAACCAAGGTACTGAAACTATCCAACCAACAAACATGGATCAACAAAATGCGGTAGATGAGTCTGTTAAACCCAGTTCAACTACATCAGTCTTTGTGAACTCGGAACCATTGCGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTGTCACACCCAAAAGTTAAAGGTTCGCCCGTCATGTACCGGCGGTCATTTTTGGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTACCTGATGCGGCTCCGACTGTGCAGACGGATGGTGGAAATCAAGATGGGCAATTGAAATCATCATCAAATATTCAGCAACAGGCCCAACAGAAAACTTTACAGCCTGTTTTACCTGCTTCTGCTGGTGTTAATACTTCATCAGGAACCTTATCACGAACCAAATATCACTGGTCCCATGCCCTTATTTTAGTTGGAGTCCTGACTGCTTCAGGTGCTGGAACAGTTTTGATAATTAAGAATTCCCTTCTTCCTCGGTTAAAATCTTGGATACGCAAGGTTGTCTTAGACAATGATGATGAATTATCAAAAGAAACTAACAACAAACCAACTCTGGCTGAAGAAGTTGCTCAAGCTGCAAAATCAGCAGCAGCTGCAGCTGCAGATGTGGCAAAAGCAAGCCAAGATATGCTGGCTTCAAAGGGTGAAGAAAGGAAATACTTTGTGGAAGTTGTGAGTCTTTTAGATAAGCAAATACAAGAAATGAAGTTAATGACAAATGCAATAAGAAGATTGGAAGGGCAAGAAGATCTCCGAGCCAGTCAAACAAGTTCGAAGCGACTGGTTGTGAATGGCAAGGCAGACTATGACTTGCGTTCAGGGAGATCATTATCCCCGCCTGCATCTGTTGAACCATCAGGTCCTCCTCATCCAAAATCATATATGGAGATAATGGCCATGGTCCAAAGAGGGGAGAAGCCTTCTAACATCAGAGAGATCAATGATTTACCCCCCAACCCAAGTCAACAGCCATCTGATCCTCGCATATTGCCTAGATCTAAGCCTTGGGAGATTGGTCAGGTTCAAAATACGTCTAGCCAACTGTTTCAGCCTCAAGCATACGGTGAGGAATTGTATACCAAAGTCCAAGATACTACCCAATCAAATGGGGATGACCCATCCCCCTGGTGGCAGAAGAAAAATGTCAGAATCAGGGAGATTGATGAAAATGTGTCTAATGGAGCACCTAATGGCACCACGCCCAGTCAGCAGCCCCTACAACGTGTGTGGGTTCCTCCTCAACCTCCACCAATAGCTATGGCAGAAGCTGCAGAAGCAATCAGACGCCCAAAACAAGCTGTTCAAAAAGAACCGGCGTCAGATAATCAGTCAGTAACTCAATCTTCAGACACCTCTAACTCTAATGGGGTGCATGAGATCCCAAAACCATTGGAAACTGATGGTGCTGTAGAGGGAAGCAATGTCAGCTCTGGTGAGATCCAAGTCGGACAAGAAGACCATGAAACCAAATACGAAGAGCAATGA 1575 0.454 MATKSPPPPPVATATATVADVNQGTETIQPTNMDQQNAVDESVKPSSTTSVFVNSEPLREEQVQNAVKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDAAPTVQTDGGNQDGQLKSSSNIQQQAQQKTLQPVLPASAGVNTSSGTLSRTKYHWSHALILVGVLTASGAGTVLIIKNSLLPRLKSWIRKVVLDNDDELSKETNNKPTLAEEVAQAAKSAAAAAADVAKASQDMLASKGEERKYFVEVVSLLDKQIQEMKLMTNAIRRLEGQEDLRASQTSSKRLVVNGKADYDLRSGRSLSPPASVEPSGPPHPKSYMEIMAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNTSSQLFQPQAYGEELYTKVQDTTQSNGDDPSPWWQKKNVRIREIDENVSNGAPNGTTPSQQPLQRVWVPPQPPPIAMAEAAEAIRRPKQAVQKEPASDNQSVTQSSDTSNSNGVHEIPKPLETDGAVEGSNVSSGEIQVGQEDHETKYEEQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03230 524 Coils Coil 258 278 - -
Vifa4g03230 524 Pfam Pex14 N-terminal domain 59 103 IPR006785 -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 466 489 - -
Vifa4g03230 524 Gene3D - 51 112 IPR036388 -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 422 437 - -
Vifa4g03230 524 FunFam Peroxisomal membrane protein PEX14 51 113 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 339 362 - -
Vifa4g03230 524 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 21 506 IPR025655 GO:0005515|GO:0005778|GO:0016560
Vifa4g03230 524 MobiDBLite consensus disorder prediction 280 323 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 420 524 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 16 50 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 106 149 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 1 50 - -
Vifa4g03230 524 Pfam Family of unknown function (DUF5572) 319 367 - -
Vifa4g03230 524 MobiDBLite consensus disorder prediction 111 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03230 K13343 - gmx:100784152 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03230 4 1016645608 1016652775 Vifa4g03230 4 1016645608 1016652775 ECH