Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03218 ATGCTAGGGGAGGTAACTGCATCAAAGAGACCCATGAATAGTGCTTTGGAAGTTGATATTGACTTTGAGCATAATGTGAGACCTGCTTTTGTCATCACTGACGAGATTAATTCTTCAATTGAGGAAATGATCAAGAAAAGGATTATTGAGGGGAGGTTTGATGATGTTAAAAGAACTCCTAAATTGCCATTGAAAGCGCATCGGAAAGTTAAAGACTTGGATGATAATAAAAGCAAGCAGGGTCTAGCAGAAATTTATGAGCAAGAATATGTTGAGAAGGCTTACCCCACTTCAGTTCCGTTGTCACACGAAGATAAACGAAAAAATATGGCAAGCATGTTGTTTAACAAGTTCTGTTTGAAAGCGGACGCCCTTTCCCATTTCAACTTTGCTCCAAAACCTGTTATAGAGGACATGTCCTTTGAAAGAAATGTACCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAAATGCTGCTATGCTGGCCCCTGAGGAGATTTTTAGTGGTAAGGGTGATGTTAAGGAAGAATCAGAACTTACACGGATAGAAAGGAAAAGGAGGAGATCTAATAAGAAAAGGAAATTTAAAGCTGAGTCAACAAAAAGGTCGGAAAAGAAGTCAGACCTTGAAAAATGA 645 0.3938 MLGEVTASKRPMNSALEVDIDFEHNVRPAFVITDEINSSIEEMIKKRIIEGRFDDVKRTPKLPLKAHRKVKDLDDNKSKQGLAEIYEQEYVEKAYPTSVPLSHEDKRKNMASMLFNKFCLKADALSHFNFAPKPVIEDMSFERNVPALAMEEIAPVAVSNAAMLAPEEIFSGKGDVKEESELTRIERKRRRSNKKRKFKAESTKRSEKKSDLEK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03218 214 Pfam Mpp10 protein 1 205 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vifa4g03218 214 MobiDBLite consensus disorder prediction 188 202 - -
Vifa4g03218 214 MobiDBLite consensus disorder prediction 175 214 - -
Vifa4g03218 214 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 1 210 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03218 Vifa-Chr4 1014455254 1014456944 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03218 K14559 - gmx:100781093 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03218 4 1014455254 1014456944 Vifa4g03218 4 1014455254 1014456944 ECH