Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03203 ATGAAAAAATCATGGATTGCGGCGATGTATTTTGTTATGGCTACGATTTGCAGCACAACTGCCACAAACGAATCGCCACCATACACAGTCGTTCACACCGAGTCCGATTTCGAGATCAGACTCTACCAAACCTCCGTCTGGATGTCCGCTCCCGTCCTAAACACCATCTCCTTCGAGAAAGCCACATGGAACGGCTTCCACAGACTCTTCCAGTTCATACAAGGCGCAAATCTCAACTTCTCTCGAATTCCGATGACCGCTCCGGTATTAACAACCATGGTACCCGGTGCTGGTCCTCTCGAGTCACAAGGCTACTATGTTAGTTTCTATTTGCCGCTGAAATTTCAAGCGGATCCGCCGCTTCCACTTCCGGAACTCGATATAAAACCCTATGATTTCGATGGACACTGCGTTGCTGTGAGAAGATTCTCTGGATTTGCGAAGGATGAGAGGATTGTTAAAGAGGCGGAGAAGCTGGATTCGAGTTTGAGTAGGTCGCCGTGGGGGGAGTTCAAGAGTGGACGCGGTTACTCCATTGCGCAGTATAATTCTCCTTTTCGGATTGCTAAGCGGAGGAATGAGGTTTGGGTGGATGTTCATGCTCCTGAATTGGGATCTAACTCAGTTGGTGTTGCAGTATATTGA 645 0.4837 MKKSWIAAMYFVMATICSTTATNESPPYTVVHTESDFEIRLYQTSVWMSAPVLNTISFEKATWNGFHRLFQFIQGANLNFSRIPMTAPVLTTMVPGAGPLESQGYYVSFYLPLKFQADPPLPLPELDIKPYDFDGHCVAVRRFSGFAKDERIVKEAEKLDSSLSRSPWGEFKSGRGYSIAQYNSPFRIAKRRNEVWVDVHAPELGSNSVGVAVY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03203 214 PANTHER HEME-BINDING PROTEIN-RELATED 18 199 IPR006917 -
Vifa4g03203 214 SUPERFAMILY Probable bacterial effector-binding domain 15 199 IPR011256 -
Vifa4g03203 214 Pfam SOUL heme-binding protein 24 197 IPR006917 -
Vifa4g03203 214 Gene3D Regulatory factor, effector binding domain 23 207 IPR011256 -
Vifa4g03203 214 FunFam Heme-binding protein 2 23 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03203 Vifa-Chr4 1012109433 1012110077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03203 - - gmx:100306073 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03203 4 1012109433 1012110077 Vifa4g03203 4 1012109433 1012110077 ECH