Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03127 ATGGCGAACGCTACCTTGGAAGATGTTCCCTCCGTCGATCTCATGACCGAGCTACTTCGTCGCCTCAAGTGTTCATCCAAACCCGACAAGCGTCTTATTCTCGTTGGCCCACCTGGATCTGGAAAAGGCACCCAGTCGCCAATCATTAAGGATGAGTACTGCTTATGTCACTTGGCTACCGGTGATATGTTGAGAGCCGCTGTAGTAGCAAAGACCCCTCTTGGTATTAAGGCGAAAGAAGCTATGGAAAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGCATTATTGATGAAGCAATTAAAAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGAAAAACAAGGTACCAAAATTGACAAAGTGCTCAATTTTGCGATTGATGATGCAATCCTTGAGGAGAGAATTACTGGACGCTGGATACACCCTCCTAGTGGCAGAACCTACCATACAAAGTTTGCTCCTCCCAAGGCTCCTGGTGTTGATGATGTTACTGGTCAACCTCTTATTCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTGGAGGCATTTCACAAGCAAACTGAACCGGTTATTGATTACTATACAAAGAAGGGCGTTGTTGCTAGTCTCCATGCTGAAAAACCTCCCAAAGAGGTGACTGTGGAGGTCGAGAAAGTGCTCTCGCAATAG 732 0.4577 MANATLEDVPSVDLMTELLRRLKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVVAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAIKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGTKIDKVLNFAIDDAILEERITGRWIHPPSGRTYHTKFAPPKAPGVDDVTGQPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYTKKGVVASLHAEKPPKEVTVEVEKVLSQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03127 243 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 Gene3D - 2 242 IPR027417 -
Vifa4g03127 243 PANTHER NUCLEOTIDE KINASE 8 238 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Vifa4g03127 243 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Vifa4g03127 243 Pfam Adenylate kinase 34 219 - -
Vifa4g03127 243 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa4g03127 243 FunFam Adenylate kinase mitochondrial 30 243 - -
Vifa4g03127 243 NCBIfam adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vifa4g03127 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 241 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03127 Vifa-Chr4 992005673 992010617 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03127 K00939 - gmx:100791848 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03127 4 992005673 992010617 Vifa4g03127 4 992005673 992010617 ECH