LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa4g03105	ATGGCGGATCCGATCCCAGCGCATCACAGATCCGCCACCAACCTCTTCTCCGATCCACTCGACTCCCACCCGCTATGGTTCAAACCAGCCTCCTTCCTCTCCCCCGACTTCGATTCCGAATCCTACATTTCCGAACTCCGAACGTTCGTCCCCTTCGACACTCTCCGTTCGGAGCTTCACAACTACCTCTCGTCGCTGAATCATGAACTCATTGATCTAATTAACCGCGATTACGCTGATTTCGTTAACCTGAGTACTAAGCTTGTTGATGTGGATGCTGCTGTGGTGAGGATGCGGGCGCCGTTGGTTGAGCTTAGGGAGAAGATTGAGCAGTTTAGGGGATCTGTGGATGTTTCGCTTGTTGCTATAAAGAATGGTTTGAAGCAAAGATCTGAAGCTGCTTCTGCCAGAGAGACTTTGGAGCTTCTTCTTGATACGTTTCATGTTGTTTCTAAGGTTGAGAAACTAATAAAAGAGCTGCCAAGTGTACCCTCTGACTGGTCAAATGGAGACGTGCAACATGTTGAGAACGGTACAAGTGTCAGAGAGACTCAAAGTATGCTGCTGGAAAGAATTGCCAGCGAGATGAACAGGCTAAAGTTCTATGTTACACATGCCAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCTTATTAGTAGATGCAAGCTTGGGACATTGCTTTGTAGATGGGCTTGAACACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCCATTGATAACACCAAGAATGCAGAAGAAACCTTCCGAGTTACTGTTGTGGCTCCTTTGATACAGAAGATTATCCCACATGGGTCATCAGCTGTGGCTGCTGGATCATTTGGGGATGGGCTTGAAAATGATTATCAACAAATTAAGGAGTGCATTTATAGAGACTGTAAATTTTTATTGGATATTTCTTCAGCTGAAAATTCAGGTTTACACGTCTTTGACTTTTTGGCCAATTCAATCCTTAGAGAGGTTCTCTTTGCTATTCAGAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCTAGCTTGGAGTTCTTGGCTTATCTAGAAGGCTACTGTCCGTCCAGATCTGCTGTTGCTAAATTTCGATCCGAAACAATTTATACGGAATTCATGAAGCAATGGAATCTTGGAGTGTATTTTTCGTTGAGATTTCAGGAAATAGCAGGGTCTTTAGATTCTGTACTGACAACATCCAGTCTTGTCCCCATTCCAAATTTAGATCCCGGCGAAGCAAATTATCAAGACTTAACACTAAAGCAAAGTGTAACTCTGTTGGATAGTTTGAGATTGTGCTGGAGAGAAGATGTTCTCGTCCTTTCTTGTTCTGACAAGTTCCTTCGCCTATCCTTGCAGCTTCTTTCTAGATACTCAAATTGGTTGTCATCTGGATTGACTGCACGCAAGAGTCATAGTACAAGCACTAGCACTGGGCGCGACTGGGCTGCTTCAGCTGTCATAGATGACTTTATCCTTGTTATTCATGATATCAGATGTTTGGAGGAGCATGTTCGTGGTGATTACTTACAACATGTGGTTCAGGTTTTATCTTCATGCTCATCCGATGTTCTTGAATCAGTAAGGCAGAGCATCTTACAGAGTGGTCAATCCTTGAAATCTTTAGAACCTTTAGTCGTCAAAGCAGTGGTCGAGTCACTGGTGGAGAAGTCAGTCGAGGACTTGAGACAGATGAAGGGGATAACAGCAACTTACAGGATGACTAATAAACCTCTACCTGTTAGGCATTCACCATATGTTACGGGAGTATTACGTCCACTAAAGACTTTTTTGGATGGGGAAAGAACCTCTAGATATTTGGCAAATGAAACAAAAAAGGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGTGTGGCAAGAAAGACAGAATCTTCTCTTCAGAAAATTAGACAGAGTGCACAAAGACGAGCGGGGGCAAGTTCAGACATCTCTGATAATAATGTGTCTGACACTGACAAAATGTGCATGCAGTTATTCCTTGATATTCAGGAGTATGCCCGCAACCTATCTTCCCTAGGGGTTGAAGCAGTTAATATTGCATCCTATCGTTCATTATGGCAGTGTGTGGCTCCAGCAGATAAGCAGAACACAATTAAATTATGA	2226	0.4299	MADPIPAHHRSATNLFSDPLDSHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELHNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVDVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVQHVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLLVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSSAVAAGSFGDGLENDYQQIKECIYRDCKFLLDISSAENSGLHVFDFLANSILREVLFAIQKGKPGAFSPGRPTEFLKNYKSSLEFLAYLEGYCPSRSAVAKFRSETIYTEFMKQWNLGVYFSLRFQEIAGSLDSVLTTSSLVPIPNLDPGEANYQDLTLKQSVTLLDSLRLCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLTARKSHSTSTSTGRDWAASAVIDDFILVIHDIRCLEEHVRGDYLQHVVQVLSSCSSDVLESVRQSILQSGQSLKSLEPLVVKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVTGVLRPLKTFLDGERTSRYLANETKKEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDISDNNVSDTDKMCMQLFLDIQEYARNLSSLGVEAVNIASYRSLWQCVAPADKQNTIKL	741

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa4g03105	741	Pfam	COG complex component, COG2, C-terminal	575	703	IPR024603	-
	Vifa4g03105	741	Pfam	COG (conserved oligomeric Golgi) complex component, COG2	25	156	IPR024602	-
	Vifa4g03105	741	PANTHER	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2	11	738	IPR009316	GO:0007030\|GO:0015031\|GO:0016020

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa4g03105	K20289		-	gmx:100817096	1269.6

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa4g03105	4	990410840	990418416	Vifa4g03105	4	990410840	990418416	ECH