Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03089 ATGAACTCTCGGGAACTTTCTCTAGTTGCCACGGCAACTCTAGTTGGCGCCTTCGCCTCCGCAATCGCTCTCCGTTTCTTTCACCAATCCAAAACCAATCCCACTCAAAACGGCACCATCTCTTCTTCTACCGACCCTTTCGACACCTCCAAACGCAAAGGATACTTGTCGTGGGATGATTATTTTATGGCTATTGCTTTTTTGTCCGCTGAAAGATCTAAAGACCCTAACAGGCAGGTTGGTGCTTGCTTAGTGAGTCAAGATGGTATAATTCTTGGGATTGGTTATAATGGATTTCCAAGAGGCTGTTCTGATGACAAGTTACCATGGGCCAAGAAATCAAAGACCGGGAATCCTTTGGAGACTAAGTACCCTTATGTTTGTCATGCTGAAGTAAATGCTATTCTTAATACAAACCATGCCTCTGCTGCTGGACAACGGCTGTATGTGACCATGTTTCCATGCAATGAGTGCGCCAAGATCATAATCCAGTCTGGAGTTTCTGAAGTCATTTATTTTGTGGAGAAAAGATTAGAAAATTCAGATGTTGCATACACTGCCTCTCACAAGCTACTTTCCTTGGCTGGTGTTAAGGTCAGGAAACACCAACCAGTGGCGAGTGAAATTCATCTGAAGTATGATGAGCACTAG 651 0.4409 MNSRELSLVATATLVGAFASAIALRFFHQSKTNPTQNGTISSSTDPFDTSKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSKTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDVAYTASHKLLSLAGVKVRKHQPVASEIHLKYDEH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03089 216 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 40 216 IPR015517 -
Vifa4g03089 216 SUPERFAMILY Cytidine deaminase-like 59 203 IPR016193 GO:0003824
Vifa4g03089 216 CDD deoxycytidylate_deaminase 59 172 IPR035105 -
Vifa4g03089 216 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 57 173 IPR002125 -
Vifa4g03089 216 Gene3D Cytidine Deaminase, domain 2 48 216 - -
Vifa4g03089 216 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 129 162 IPR016192 GO:0008270|GO:0016787
Vifa4g03089 216 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 57 199 IPR002125 -
Vifa4g03089 216 FunFam Deoxycytidylate deaminase 48 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03089 Vifa-Chr4 988039675 988041808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03089 K01493 - gmx:100792003 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03089 4 988039675 988041808 Vifa4g03089 4 988039675 988041808 ECH