Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03046 ATGCACCCACCATGTTCTGGAGGAACATGCTCACAACCTTGCTTCAATGGTTGTTTTCCATCTCCATTTCTTGCCTCTGAGGCCTCCCATAACAACACTTCCAACTCAAATAAAACTGACTTAACCGCAGCCACATCCTCAACCGATTCATTCCATTTTCAATCTAAAGGATCGGAACTTCTCACAGTTTATGATCATAACAATGAAGCATTAGAAATGATGATAGATAGCTGCAAGAAACAAGGAGTGAAAATTTTATCAGCAGAATTCACCTGGCCCAATCTAGGAATGGAATGGAGAAAACTGAAGAAAATGATACAATGTAAAAAAGAGAAGAGAAAAAGTGGTTTATTTGTTTTTCCACTTTACTCAAAGGTTACTGGATCACCATATTCATATTTTTGGATGTCTATGGCACAAGAAAATGGTTGGCATGTTTTGCTTGATTTATGTGCATTGAGACCTAAAGAAATGGATACTTTAGGTTTATCTATGTTTAAACCTGACTTCATGGTTTGTTCATTTTACAAGATTTTCGGCGAAAACCCTTCTGGGTTTGGTTGTTTATTTGTCAAAAAATCAAGTCTTTCTTCTCTCAAAGATTTAGAATCTTCGTCTACGAATCAGAGGATTAATGAGGGAGCATCATCATGGTCATCAAAATCAGAAATTGTGGAGCTACAAGATATGAACATGAAGGATGAAAGATTGGAAATTGAATGTAGAGGATTAGACCATGCAGACACAGTGGGACTAATTGTGATTAGTACAAGAACAAGGTACTTGATTAATTGGCTTGTTAATGCATTAATGAGTCTTCAACATCCACATGATGAAAATAGATTTTCATTGATTAGAATCTATGGCCCAAAGGTTAACTCTCATCGTGGATCTACCGTTGCATTTAATATATTTGACTGGAAAGGAGAAAAAATTGATCCAGCACTTGTTCAAAAGTTAGCTGATAGAAATAATATCTCATTAAGTAGGTCTTGTTTGAGAAATATCAAGTTCTTAGATAAGAACATAGAAGAAAGGGAATGGGCTTTGGAAAGTAAAGCCACTGAGGTTGAGAAGATGGGAATGTCCAAGAAGAAGAAAAGCCCATATGAGAATGGGATATGGGTTTTAACTGCTACATTGGGCTTTTTGACAAACTTTGAAGATGTTTATAGGTTATGGGCTTTTGTTTCTAGGTTTCTTGATGCAGATTTTGTGGAGAAAGAGAGATGGAGGGAATCAGGAGATCGAGTTATTCCAAATGTTTCTTGA 1272 0.3624 MHPPCSGGTCSQPCFNGCFPSPFLASEASHNNTSNSNKTDLTAATSSTDSFHFQSKGSELLTVYDHNNEALEMMIDSCKKQGVKILSAEFTWPNLGMEWRKLKKMIQCKKEKRKSGLFVFPLYSKVTGSPYSYFWMSMAQENGWHVLLDLCALRPKEMDTLGLSMFKPDFMVCSFYKIFGENPSGFGCLFVKKSSLSSLKDLESSSTNQRINEGASSWSSKSEIVELQDMNMKDERLEIECRGLDHADTVGLIVISTRTRYLINWLVNALMSLQHPHDENRFSLIRIYGPKVNSHRGSTVAFNIFDWKGEKIDPALVQKLADRNNISLSRSCLRNIKFLDKNIEEREWALESKATEVEKMGMSKKKKSPYENGIWVLTATLGFLTNFEDVYRLWAFVSRFLDADFVEKERWRESGDRVIPNVS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03046 423 Gene3D - 28 226 IPR015421 GO:0003824
Vifa4g03046 423 SUPERFAMILY PLP-dependent transferases 53 401 IPR015424 -
Vifa4g03046 423 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 49 329 - -
Vifa4g03046 423 Gene3D Aspartate Aminotransferase, domain 1 240 399 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03046 Vifa-Chr4 982134927 982139395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03046 - - tpra:123887281 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03046 4 982134927 982139395 Vifa4g03046 4 982134927 982139395 ECH