Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03042 ATGGGATTCCCATCCAACGGCTCAGAGGAAAAGTCCCTCAAGTTTCTAATATACGGTCGCACCGGCTGGATTGGCGGACTCTTGGGCAAGCTCTGCACGGCCCAAGGGATCCAATTCGAGTACGGGTCGGGTCGTCTTGAGAACCGATCCTCCTTGGAGTCTGACATAGCGGTGGTTAAGCCAACACATGTCTTCAACGCTGCCGGTGTTACTGGTCGACCCAACGTGGACTGGTGTGAGACGCATAAGGTGGAGACTATCAGGGCTAATGTGGTGGGGACTCTTACTCTTGCTGATGTGTGCCGTGAAAGAGGACTGGTTGTTATTAATTTTGCTACTGGCTGTATTTTTGAGTATGATGAGGGCCATCCTCTTGGATCCGGTGTTGGATTTAAGGAAGAGGATACTCCTAATTTTATTGGCTCCTTTTACTCCAAGACCAAGGCTATGGTAGAGGATCTACTCAGGAACTATGAAAATGTATGTACATTGAGAGTTAGGATGCCTATTTCATCCGATTTATCCAACCCTCGCAATTTCATCACGAAGATATCTCGATACGAGAAGGTTGTCGATATTCCAAACTCGATGACTATATTGGATGAACTTCTTCCCATTTCCATAGAGATGGCAAAGAGAAATCTCACAGGAATCTGGAACTTCACAAACCCAGGAGTTGTTAGCCATAATGAAATCTTACAGATGTACAAAGACTATATCGATTCTGACTTCACATGGAAGAATTTCACTCTTGAGGAACAAGCCAAGGTGATAGTTGCTCCGAGAAGTAACAATGAGCTAGATGCAAGCAAATTGAAGAAGGAATTTCCAGAACTGTTGTCTATTAAGGAGTCACTCATTGAGAATGTGTTCAAGCCAAATCAGAAGGTTAAAGCTTGA 900 0.4456 MGFPSNGSEEKSLKFLIYGRTGWIGGLLGKLCTAQGIQFEYGSGRLENRSSLESDIAVVKPTHVFNAAGVTGRPNVDWCETHKVETIRANVVGTLTLADVCRERGLVVINFATGCIFEYDEGHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLRNYENVCTLRVRMPISSDLSNPRNFITKISRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILQMYKDYIDSDFTWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIENVFKPNQKVKA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03042 299 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 4 299 - -
Vifa4g03042 299 Gene3D - 4 299 - -
Vifa4g03042 299 CDD dTDP_HR_like_SDR_e 14 286 - -
Vifa4g03042 299 Pfam RmlD substrate binding domain 14 186 IPR029903 -
Vifa4g03042 299 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 12 296 IPR005913 -
Vifa4g03042 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03042 Vifa-Chr4 981332235 981333646 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03042 K12451 - zju:107405251 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03042 4 981332235 981333646 Vifa4g03042 4 981332235 981333646 ECH