Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02982 ATGGCTTCATCTAAACATCTCTTCCTCTTCCTCATCAGTATTCTCTTCCTTCTTACACTCTCTTCTGCAGAAGATGCATTTGTTCCCTACAACTTTGAAGTCTCCTACATCACTGCATCTCCTCTTGGAGTACCCCAACAGGTAATTGCTATCAACGACCAGTTTCCAGGTCCTACTATTAATGTAACAACAAACAACAATGTTGCTGTTAATGTCCGGAACAAATTGGACGAGAGTCTCCTCATTCATTGGTCTGGGATTCAGCAAAGGAGGAGTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCACCAAAATGGAACTGGACTTACCAGTTTCAGGTGAAGGATCAGATTGGAAGCTTTTTCTACTTTCCTTCACTTCATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATCATCAATAACCGGCCTGTTATTTCGGTTCCTTTTGATACTCCTCAGGGGGACATTGTTGTTTTTATTGGAGATTGGTATACTCGTAATCACACGGATTTGAGAAAGGATCTAGATGATGGAAAAGATCTTGGCATGCCAAATGGTGTTCTCATAAATGGAAAAGGCCCTTATAGATATAATGATACACTTGTTCCCGAGGGCATTGATTTCGAACAACTCGATGTTCAACCTGGAAAAACTTACCGATTACGTGTACATAACGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAAACTGAGGGGTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTAGCGAGTGCGAGGTTTGTGAATGAATCGCGTTGGAAAAGAGTTACTGGTGTTGGTATCTTGCATTATACAAATTCCAAGGGGAAAGCAAAAGGTCCTTTACCAGCAGGTCCTGATGATCAATTCGACAAAACCTATTCAATGAACCAAGCAAGATCGATCAGATGGAATGTATCAGCCAGTGGTGCTCGTCCGAATCCACAAGGATCATTCAGATACGGTTCCATCAATGTGACAGATATTTATGTATTAAAAAATAAGCCACTAGTGAAAATTGATGGGAAGCGGCGAGCAACGCTTAGTGGAATCTCTTATACCAACCCTGCTACTCCACTAAGGCTTGCTGACCAATTCAAGGTAAAGGGAGTATACAAGCTTGATTTCCCAACGAAGCCTCTAACCGGATCTCCTCGGATAGAAACATCGGTAATCAATGGAAGCTTTAGAGGATTTATGGAGATTATACTGCAGAACAATGACACCAAGATGCATACCTATCACTTGAACGGATATGCCTTTTTTGTAGTAGGGATGGACTTCGGCGATTGGTCTGAGAATAGCAGGGGTACATATAACAAGTGGGACGGAATAGCTCGTAGCACAGCACAGGTTTATCCCGGTGCATGGACAGCAGTTTTGGTCTCCCTCGACAACGTTGGAATTTGGAATCTGAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGAGTTGTCAACCCCGAGCCTACGAACAAGACCGAGTTACCAATTCCAGACAATGCCCTTTTCTGCGGCGCCCTTGCAAAGAAGCAAAAGCAACAAATAATTTCTTCAGCTGCTTCATTCAATGGAAATGGACTGAAGTTGTTATTCACTTTGCTTAATGTATTGTGGTTCCCAGTTTAA 1764 0.4161 MASSKHLFLFLISILFLLTLSSAEDAFVPYNFEVSYITASPLGVPQQVIAINDQFPGPTINVTTNNNVAVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLHFQRAAGGFGGFIINNRPVISVPFDTPQGDIVVFIGDWYTRNHTDLRKDLDDGKDLGMPNGVLINGKGPYRYNDTLVPEGIDFEQLDVQPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWKRVTGVGILHYTNSKGKAKGPLPAGPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDIYVLKNKPLVKIDGKRRATLSGISYTNPATPLRLADQFKVKGVYKLDFPTKPLTGSPRIETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGIWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPIPDNALFCGALAKKQKQQIISSAASFNGNGLKLLFTLLNVLWFPV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02982 587 PANTHER MULTI-COPPER OXIDASE 46 533 IPR045087 -
Vifa4g02982 587 SUPERFAMILY Cupredoxins 380 551 IPR008972 -
Vifa4g02982 587 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Vifa4g02982 587 Pfam Multicopper oxidase 161 313 IPR001117 -
Vifa4g02982 587 Gene3D - 19 146 IPR008972 -
Vifa4g02982 587 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vifa4g02982 587 Gene3D - 364 563 IPR008972 -
Vifa4g02982 587 Gene3D - 158 351 IPR008972 -
Vifa4g02982 587 FunFam Monocopper oxidase-like protein 363 561 - -
Vifa4g02982 587 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Vifa4g02982 587 FunFam Monocopper oxidase-like protein 158 351 - -
Vifa4g02982 587 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Vifa4g02982 587 Pfam Multicopper oxidase 399 533 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02982 Vifa-Chr4 953874426 953877280 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02982 - - gmx:100788318 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02982 4 953874426 953877280 Vifa4g02982 4 953874426 953877280 ECH