Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02970 ATGCGCGTCAAGGAAATGCACCCGTTGTGCTGCATCTCATTGGAGAGTCCCGGGATCGGAAGTGATTCTCCGGACACAGACGCGGCGGCACTTTCGAGGACGAGGAGTTTACCGGCGTGTGGATCTGACCGCATTTGTCGCCGTGGATCGGAGGCGACGGTTGCCGGAGTTTTATATAAGTGGACTAATTACGGTAAGGGATGGAGATCCCGGTGGTTTCTCCTCCGTAATGGCGTGCTTTCTTACGCTAAGATCCGGTCGCCGGAGAATCTCAATCTGTTCTCTCCAATCGACGATGTTCGCTTAATTGGAGATGTCACCGCTAATCGTCTCGCGAGAATGGATAGAGACGCCGGAAACGCCGTTCGCCGGAAGAATCATAAACCTTCTTCGTCTTCGTCTTCTCCTCCTACAGTGGTTCATTTGAAGATCTCGTCGTTTAGAGAGAGCAAATCAGACGACAGAAAGTTTTACATCTTTACAGCAACAAAGACACTCCATCTGAGAACTGATTCGAGGAAAGACCGCGTGGCATGGATACAAGCTTTGGTGTCAACTCGCAGTTTGTACCCATTAAGCGGTCATCATCATCTATTTCTTGCACCTTATCATATATCTGTATCTACCGAAAGGCTTAAGAAACGCTTGGTTGAAGAGGGTAGCGGTGAGAATCTTGTCAAGGAGTGTGAGCAAATTATGCTTGCAGAGTTTTCAGAATTACAAGAGCAGCTTAAAATTCTTTGTCAAGAACGATCAAGTTTGTTTGATACGATTAGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGGATCTGCCTTGCATGACAGTGAATACCAACTAACAAAGAATGGATTTTCAAATCTAGGGCGTGGAAAATATAGTGAATGCAGTACAACGGAATCATCTGATGATATCGAGAAACAAGAAGTGTGGGTCAAATACGCTGGATCAAGTGAACATGTCCGGGGAAGCTAA 975 0.4656 MRVKEMHPLCCISLESPGIGSDSPDTDAAALSRTRSLPACGSDRICRRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRSPENLNLFSPIDDVRLIGDVTANRLARMDRDAGNAVRRKNHKPSSSSSSPPTVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVSTRSLYPLSGHHHLFLAPYHISVSTERLKKRLVEEGSGENLVKECEQIMLAEFSELQEQLKILCQERSSLFDTIRQLEAANIEPEGSALHDSEYQLTKNGFSNLGRGKYSECSTTESSDDIEKQEVWVKYAGSSEHVRGS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02970 324 Gene3D - 48 189 IPR011993 -
Vifa4g02970 324 SMART PH_update 52 190 IPR001849 -
Vifa4g02970 324 SUPERFAMILY PH domain-like 51 185 - -
Vifa4g02970 324 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 272 IPR000648 GO:0008289
Vifa4g02970 324 Pfam Pleckstrin homology domain 56 183 - -
Vifa4g02970 324 MobiDBLite consensus disorder prediction 116 138 - -
Vifa4g02970 324 ProSiteProfiles PH domain profile. 51 188 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02970 Vifa-Chr4 949872308 949877526 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02970 K20456 - gmx:100793692 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02970 4 949872308 949877526 Vifa4g02970 4 949872308 949877526 ECH