Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02965 ATGAACTCTTCTAGAACTTCAGCTCTTGTTCTTTTTTCCATTATCAACATGCTTTTCTTTGTCATGGCAAATGGTTGCTTCTTTTGTCCAAAACCAAACCCTAACCCTAGCCCTAACCCTAACCCATTTCCCTACCCAAACCCAAGTCCTTCCACTAAGAGTTGTCCTAGAGATGCACTCAAACTAGGAGTATGTGCTAATTTGCTTAATGGACCAATTGGTGCAATTGTTGGGTCACCACCAGAACATCCATGTTGCTCTATTTTAGAAGGACTAGTTGATCTTGAAGTAGCGGTTTGTCTTTGTACCGCCATTAAAGCTAACATTCTTGGCATTAACATTAATATTCCTATCTCACTTACTTTGATTCTTAACGCTTGTGAGAAGAGTCCACCCACTGATTTTCAGTGCTCTTGA 417 0.4029 MNSSRTSALVLFSIINMLFFVMANGCFFCPKPNPNPSPNPNPFPYPNPSPSTKSCPRDALKLGVCANLLNGPIGAIVGSPPEHPCCSILEGLVDLEVAVCLCTAIKANILGININIPISLTLILNACEKSPPTDFQCS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02965 138 FunFam pEARLI1-like lipid transfer protein 1 53 138 - -
Vifa4g02965 138 Gene3D - 52 138 IPR036312 -
Vifa4g02965 138 SMART aai_6 55 137 IPR016140 -
Vifa4g02965 138 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 137 IPR036312 -
Vifa4g02965 138 Pfam Hydrophobic seed protein 55 138 IPR027923 -
Vifa4g02965 138 CDD HPS_like 52 137 IPR027923 -
Vifa4g02965 138 PANTHER - 8 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02965 Vifa-Chr4 947249330 947249746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02965 46 137 Acyl Lipid Metabolism Gene Families AT4G22490 36.957 6.22e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02965 - - gmx:100527818 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02965 4 947249330 947249746 Vifa4g02965 4 947249330 947249746 ECH